Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16k01
         (788 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104724-1|AAI04725.1|  711|Homo sapiens arachidonate lipoxygena...    31   3.6  
BC103508-1|AAI03509.1|  711|Homo sapiens arachidonate lipoxygena...    31   3.6  
BC101939-1|AAI01940.1|  711|Homo sapiens arachidonate lipoxygena...    31   3.6  
BC101938-1|AAI01939.1|  711|Homo sapiens arachidonate lipoxygena...    31   3.6  
AJ305020-1|CAC34518.1|  711|Homo sapiens arachidonate lipoxygena...    31   3.6  
AJ269499-1|CAC12843.1|  711|Homo sapiens lipoxygenase-3 protein.       31   3.6  
AF182218-1|AAG16899.1|  711|Homo sapiens epidermal lipoxygenase ...    31   3.6  

>BC104724-1|AAI04725.1|  711|Homo sapiens arachidonate lipoxygenase
           3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>BC103508-1|AAI03509.1|  711|Homo sapiens arachidonate lipoxygenase
           3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>BC101939-1|AAI01940.1|  711|Homo sapiens arachidonate lipoxygenase
           3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>BC101938-1|AAI01939.1|  711|Homo sapiens arachidonate lipoxygenase
           3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>AJ305020-1|CAC34518.1|  711|Homo sapiens arachidonate lipoxygenase
           3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>AJ269499-1|CAC12843.1|  711|Homo sapiens lipoxygenase-3 protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


>AF182218-1|AAG16899.1|  711|Homo sapiens epidermal lipoxygenase
           protein.
          Length = 711

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 657 FWCFETTTKIVKCYHFCE-YFFGTKFLTG 740
           FWC +T T      H+CE +FFG ++L G
Sbjct: 253 FWCHKTFTTKYVTEHWCEDHFFGYQYLNG 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,775,085
Number of Sequences: 237096
Number of extensions: 2635536
Number of successful extensions: 4898
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4891
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)