Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16k01
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88176-3|AAB42284.1|  210|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z71261-7|CAI70415.1|  570|Caenorhabditis elegans Hypothetical pr...    28   8.8  
Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U50069-1|AAB37559.2|  884|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical pr...    28   8.8  
AL110477-11|CAB54323.1|  489|Caenorhabditis elegans Hypothetical...    28   8.8  

>U88176-3|AAB42284.1|  210|Caenorhabditis elegans Hypothetical
           protein F18F11.1 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 76  IVLKSVLFSRLLKTNCVNF*VFVFPWIHLQGRLGEI 183
           I+ K +   RL KT+ +N   FVF +  LQG L EI
Sbjct: 63  ILQKLLTIFRLTKTHALNLGKFVFSYKFLQGALSEI 98


>Z71261-7|CAI70415.1|  570|Caenorhabditis elegans Hypothetical
           protein F21C3.4b protein.
          Length = 570

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 243 DVYGVYKRCC-NMEWR*SLVNMRRHAAKWVSMSIQESPRAIRKPAASPN 386
           D + + K  C + + R  +V  +   A WV++S+ E P+ +    A PN
Sbjct: 159 DDFSLIKSSCQHYDGRSFIVEAQASLAGWVALSVHEDPQKLHTCDALPN 207


>Z70038-4|CAA93881.1|  427|Caenorhabditis elegans Hypothetical
           protein ZK1067.5 protein.
          Length = 427

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -2

Query: 481 LYHGRLYSSQTHFKYCTLSLYQGRFSF*FLI*FGEAAGLRIAL 353
           LYH   Y  Q   KYC++S+    F F  +  F   A LR+AL
Sbjct: 92  LYHTNTYLFQYISKYCSVSIVSHYFHFFLISCF--LANLRLAL 132


>U50069-1|AAB37559.2|  884|Caenorhabditis elegans Hypothetical
           protein C09B9.3 protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 20/65 (30%), Positives = 37/65 (56%)
 Frame = -1

Query: 563 NTFTILSLGLLDT*RSQSTLTRK*TSLSISRTTLFITDSFQILHIKFVSGSFFILISYLV 384
           N  +I++ G L   + +ST+ +  T LS   + + I  + Q+L  ++ SG+FF   S+ V
Sbjct: 150 NYESIVTAGFLT--KEESTIIQN-TDLSYDSSCVPIRWAIQVLRHQYRSGNFF---SHSV 203

Query: 383 WRSCW 369
           +R+ W
Sbjct: 204 YRATW 208


>U41532-7|ABD63237.1|  769|Caenorhabditis elegans Hypothetical
           protein F11D5.1c protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 155 IQGNTNT*KLTQFVFNSLENNTDLSTMSNLKTSKINENPAHA 30
           +  NTN    T  + N+  NN  +++  +LK + +   P HA
Sbjct: 238 VSSNTNVTTTTTTINNNNNNNIHINSSYSLKATTLPPTPTHA 279


>U41532-6|AAF99908.2|  812|Caenorhabditis elegans Hypothetical
           protein F11D5.1a protein.
          Length = 812

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 155 IQGNTNT*KLTQFVFNSLENNTDLSTMSNLKTSKINENPAHA 30
           +  NTN    T  + N+  NN  +++  +LK + +   P HA
Sbjct: 281 VSSNTNVTTTTTTINNNNNNNIHINSSYSLKATTLPPTPTHA 322


>AL110477-11|CAB54323.1|  489|Caenorhabditis elegans Hypothetical
           protein Y113G7B.16 protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +3

Query: 195 SEEIPL-CESSTLVDTSDVYGVYKRCCNMEWR*SLVNMRRHAAKWVSMSIQESPRAI 362
           S+++P+   SS L+D    + V +R CN +W+ S+V + R   K   + + ESP+ +
Sbjct: 2   SDDLPIDIHSSKLLD----WLVSRRHCNKDWQKSVVAI-REKIKHAILDMPESPKIV 53


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,814,309
Number of Sequences: 27780
Number of extensions: 422459
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)