Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16j12
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 382 e-106
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 382 e-106
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 382 e-106
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 382 e-106
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 381 e-105
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 381 e-105
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 381 e-105
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 380 e-105
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 380 e-105
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 238 1e-62
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 224 2e-58
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 207 2e-53
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 165 1e-40
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 158 1e-38
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 31 3.7
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 30 8.6
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 30 8.6
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 30 8.6
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 30 8.6
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 30 8.6
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 30 8.6
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 30 8.6
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 30 8.6
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 382 bits (939), Expect = e-106
Identities = 186/213 (87%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 381 bits (937), Expect = e-105
Identities = 183/208 (87%), Positives = 194/208 (93%)
Frame = +3
Query: 51 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 230
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 231 RIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 410
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 411 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 590
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 591 KVKIMLPWDQQGKNGPKKPQPDHILVTE 674
KVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVE 211
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 381 bits (937), Expect = e-105
Identities = 183/208 (87%), Positives = 194/208 (93%)
Frame = +3
Query: 51 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 230
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 231 RIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 410
RIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 411 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 590
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 591 KVKIMLPWDQQGKNGPKKPQPDHILVTE 674
KVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVE 211
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 381 bits (937), Expect = e-105
Identities = 186/213 (87%), Positives = 196/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 380 bits (936), Expect = e-105
Identities = 185/213 (86%), Positives = 197/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 380 bits (934), Expect = e-105
Identities = 185/213 (86%), Positives = 196/213 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRAC 395
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 396 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 575
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 576 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTE 674
GVLGIKVKIMLPWD GK GPKKP PDH+ + E
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 212
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 238 bits (583), Expect = 1e-62
Identities = 112/127 (88%), Positives = 118/127 (92%)
Frame = +3
Query: 294 LYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 473
LYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 474 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 653
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 654 DHILVTE 674
DH+ + E
Sbjct: 121 DHVSIVE 127
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 224 bits (548), Expect = 2e-58
Identities = 109/127 (85%), Positives = 116/127 (91%)
Frame = +3
Query: 222 KGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYG 401
+GRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 402 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 581
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 582 LGIKVKI 602
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 207 bits (506), Expect = 2e-53
Identities = 104/118 (88%), Positives = 111/118 (94%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRR 389
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 165 bits (402), Expect = 1e-40
Identities = 83/96 (86%), Positives = 89/96 (92%)
Frame = +3
Query: 36 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 215
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 216 GEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRG 323
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 158 bits (384), Expect = 1e-38
Identities = 73/86 (84%), Positives = 77/86 (89%)
Frame = +3
Query: 417 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 596
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 597 KIMLPWDQQGKNGPKKPQPDHILVTE 674
KIMLPWD GK GPKKP PDH+ + E
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVE 86
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 31.1 bits (67), Expect = 3.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 560 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGN 670
CAS RS R Q Q P P A RP PG+
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGS 150
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.9 bits (64), Expect = 8.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 281 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 153
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,228,452
Number of Sequences: 237096
Number of extensions: 2549871
Number of successful extensions: 10141
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10140
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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