Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16j11
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 147 8e-36
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 131 5e-31
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 131 5e-31
Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 112 3e-25
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 111 4e-25
AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical ... 111 4e-25
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 110 1e-24
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 103 9e-23
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 29 4.3
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 29 4.3
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 28 5.7
Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 27 9.9
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 147 bits (356), Expect = 8e-36
Identities = 77/193 (39%), Positives = 113/193 (58%), Gaps = 6/193 (3%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR-----CSRTQIPVL-LVHG 296
P++L++V E+ T GY E H VVT DG++LT+ R+ G+ S+T PV+ L HG
Sbjct: 271 PEALMDVPEIITHWGYPVETHKVVTVDGYILTLHRIPHGKNETSKSASKTPKPVVFLQHG 330
Query: 297 LLQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADE 476
LL ++ WL P Y+ AD +DVWL N RGN YS+ H + +D +W FS +E
Sbjct: 331 LLCTSSIWLLNLPRQSAGYIFADQGYDVWLGNMRGNTYSKEHTRMT-SADRRFWKFSWEE 389
Query: 477 IGYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAPATRQ 656
+ +DLPA+++Y L ++ L YVG SQGA T F SE P +KI+ A+AP R
Sbjct: 390 MARYDLPAMINYALKTTKRQNLYYVGHSQGALTMFAKMSEDPEMSKKIRKFFAMAPVARM 449
Query: 657 TNTKSTMYRRLTQ 695
++ K +++ L Q
Sbjct: 450 SHVKG-LFQNLGQ 461
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 131 bits (316), Expect = 5e-31
Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC---SRTQIPVLLV-HGLL 302
P+ +N +++ R GY+ E H V TEDG++L + R+ G+ + PV+L+ HGLL
Sbjct: 29 PELNMNTSQIIERWGYKAEVHTVTTEDGYILQMQRIPYGKTSVTWPNGKRPVILLQHGLL 88
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
A W+D P A++ ADA DVWL N RG Y R++ LDP S+ A+W FS DE+
Sbjct: 89 ACASDWVDNLPTQSAAFVFADAGFDVWLGNVRGTTYGRKNTKLDP-SETAFWQFSWDEMA 147
Query: 483 YFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERP--NYCEKIKLMIALAPATRQ 656
+D+PA++D+VL + + L Y+G SQG F ++ ++ +KIK ALAP
Sbjct: 148 QYDVPAMVDHVLAMTGQENLYYMGHSQGTLIMFTHLAKDTDGSFAKKIKRYFALAPIGAV 207
Query: 657 TNTK 668
N K
Sbjct: 208 KNIK 211
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 131 bits (316), Expect = 5e-31
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 6/172 (3%)
Frame = +3
Query: 147 LNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC------SRTQIPVLLVHGLLQS 308
L+ EL GY E +N T+DGF+L + R+ G+ + ++ + L HG L S
Sbjct: 34 LDTPELIKSWGYSVEIYNTTTKDGFILELHRIPYGREVPTSSDVNNSRPVIFLQHGFLCS 93
Query: 309 ADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYF 488
+ W+ P ++ ADA DVWL N RGN YSR+H++L+PD D +W++S D+I +
Sbjct: 94 SFDWVANSPHQSAGFVFADAGFDVWLGNFRGNTYSRKHVSLNPDKDPKFWDWSWDQISEY 153
Query: 489 DLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAP 644
DLPA++ L S + L Y GFS G T F S P + KIK ALAP
Sbjct: 154 DLPAMIGKALEISGQESLYYTGFSLGTLTMFAKLSTDPKFSRKIKKYFALAP 205
>Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical
protein F54F3.3 protein.
Length = 405
Score = 119 bits (286), Expect = 2e-27
Identities = 68/186 (36%), Positives = 103/186 (55%), Gaps = 5/186 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY ++V TEDG++L + R+ G+ + PV+ + HGL
Sbjct: 25 PEMKMTTPQIIMRWGYPAMIYDVTTEDGYILELHRIPYGKTNVTWPNGKKPVVFMQHGLE 84
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
S+ +W+ P A+L ADA +DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 85 CSSSNWVVNLPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKP-SHSAFWDWSWDEMQ 143
Query: 483 YFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSE-RPNYCEKIKLMIALAPATRQT 659
+DLPA+++ L + D L Y+G SQG T F SE + + KIK ALAP
Sbjct: 144 QYDLPAMIEKALEVTGQDSLYYIGHSQGTLTMFSRLSEDKVGWGNKIKKFFALAPVGSVK 203
Query: 660 NTKSTM 677
+ K +
Sbjct: 204 HIKGAL 209
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 112 bits (269), Expect = 3e-25
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Frame = +3
Query: 123 LGYPPDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRV--SSGQRCSRT-QIPVLLV- 290
L + + V E+ GY+ E H V T D ++L + R+ ++C R+ + P++ +
Sbjct: 19 LAIDDECYMTVPEIGKHFGYESEVHLVRTTDEYILELHRIPCKQNEKCDRSSKRPIVFMQ 78
Query: 291 HGLLQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSA 470
HGLL SW+ ++ ADA D+W++N+RG S++H+ P++ +WNF+
Sbjct: 79 HGLLADGFSWIPNLANQSAGFVFADAGFDIWIANSRGTPASQKHIGYGPENQK-FWNFTW 137
Query: 471 DEIGYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPNYCEKIKLMIALAP 644
++ FDL A +D VL ++ + L Y+G SQG F +E P + +KI+ ALAP
Sbjct: 138 QQMSEFDLTASVDLVLKETKQEFLYYLGHSQGTMIMFSRLAENPEFAKKIRHFHALAP 195
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 111 bits (268), Expect = 4e-25
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY + V T+DG++L + R+ G+ + PV+ + HGLL
Sbjct: 23 PELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLL 82
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W+ P +L ADA DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 83 CASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKP-SHSAFWDWSWDEMA 141
Query: 483 YFDLPAILDYVLNRSRADILNYVGFSQGAGTFFI-MCSERPNYCEKIKLMIALAP 644
+DL A++++VL + D + Y+G SQG T F + + ++ +KIK ALAP
Sbjct: 142 TYDLNAMINHVLEVTGQDSVYYMGHSQGTLTMFSHLSKDDGSFAKKIKKFFALAP 196
>AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical
protein ZK6.7a protein.
Length = 403
Score = 111 bits (268), Expect = 4e-25
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY + V T+DG++L + R+ G+ + PV+ + HGLL
Sbjct: 23 PELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLL 82
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W+ P +L ADA DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 83 CASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKP-SHSAFWDWSWDEMA 141
Query: 483 YFDLPAILDYVLNRSRADILNYVGFSQGAGTFFI-MCSERPNYCEKIKLMIALAP 644
+DL A++++VL + D + Y+G SQG T F + + ++ +KIK ALAP
Sbjct: 142 TYDLNAMINHVLEVTGQDSVYYMGHSQGTLTMFSHLSKDDGSFAKKIKKFFALAP 196
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 110 bits (264), Expect = 1e-24
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 5/175 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC----SRTQIPVLLVHGLL 302
P+ + ++ R GY ++V T+DG++L + R+ G+ + Q V + HGLL
Sbjct: 24 PELHMTTPQIIERWGYPAMIYSVTTDDGYILELHRIPHGKTNVTWPNGKQPVVFMQHGLL 83
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W P A++ ADA DVWL N RGN YS +H L S + +W +S DE+
Sbjct: 84 CASTDWTMNLPEQSAAFIFADAGFDVWLGNMRGNTYSMKHKNLKA-SHSDFWEWSWDEMA 142
Query: 483 YFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERPN-YCEKIKLMIALAP 644
+DLPA++D VL + + L Y+G SQG T F S+ + +KIK ALAP
Sbjct: 143 TYDLPAMIDKVLEVTGQESLYYMGHSQGTLTMFSHLSKDDGIFAKKIKKFFALAP 197
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 103 bits (248), Expect = 9e-23
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Frame = +3
Query: 138 DSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR------CSRTQIPVLLVHGL 299
+ L+ + + +GY E+H V T+DG+ + + R+ G+ CS+ + V +HGL
Sbjct: 20 EETLDAADTISHYGYTVEKHYVTTDDGYTVQLQRIPVGRDDRSILGCSKRPV-VFFMHGL 78
Query: 300 LQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEI 479
S+ +L P AY+ ADA DVWL N RG Y H + + +WNFS E
Sbjct: 79 FGSSYHFLLNLPSQSAAYIFADAGFDVWLGNIRGTEYGLNHTSFSTNG-VNFWNFSLYEH 137
Query: 480 GYFDLPAILDYVLNRSRADILNYVGFSQGAGTFFIMCSERP-NYCEKIKLMIALAP 644
++DL ++YVL+ +R + L YVG SQG F +E + KI++ AL P
Sbjct: 138 SHYDLRQQIEYVLDYTRHESLFYVGHSQGTAVMFARLAEADVTWQSKIRVFFALGP 193
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -3
Query: 385 SHTSWQASASK*ARPEPGPASSHESALCSRPCTSSTGICVREHRWPLDTRKTVSTNPSSV 206
SH+++ S A PG A+ +S+ +R S C R L+ R+ + ++ SS+
Sbjct: 1456 SHSAYLVGISHPAS-SPGRAALIDSSEVARSVESINASCQRVESRQLN-REELMSDISSI 1513
Query: 205 TTLCSSH*YPCRVASSVT 152
T SS CR+AS T
Sbjct: 1514 TKQSSSLAQLCRIASEKT 1531
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -3
Query: 385 SHTSWQASASK*ARPEPGPASSHESALCSRPCTSSTGICVREHRWPLDTRKTVSTNPSSV 206
SH+++ S A PG A+ +S+ +R S C R L+ R+ + ++ SS+
Sbjct: 1456 SHSAYLVGISHPAS-SPGRAALIDSSEVARSVESINASCQRVESRQLN-REELMSDISSI 1513
Query: 205 TTLCSSH*YPCRVASSVT 152
T SS CR+AS T
Sbjct: 1514 TKQSSSLAQLCRIASEKT 1531
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 311 SALQQTVHEQHWDLCTRAPLAARHAENGQHESVLRDYVMLLALIPVS 171
SAL +H +W+ C A R G+ SVL + IP++
Sbjct: 679 SALPNILHASYWESCDVASFLLRQFVRGEENSVLTTLSSSMNNIPLN 725
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 311 SALQQTVHEQHWDLCTRAPLAARHAENGQHESVLRDYVMLLALIPVS 171
SAL +H +W+ C A R G+ SVL + IP++
Sbjct: 679 SALPNILHASYWESCDVASFLLRQFVRGEENSVLTTLSSSMNNIPLN 725
>Z66496-5|CAA91280.2| 507|Caenorhabditis elegans Hypothetical
protein E04D5.3 protein.
Length = 507
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 340 EPGPASSHESALCSRPCTSSTGICVREHRWPLDTRKTVSTNPSS 209
EP P SHES +RP V R+P+ T + ++ PSS
Sbjct: 298 EPYPYDSHESGYPTRPANYP----VASSRYPIPTTQAPASYPSS 337
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +3
Query: 234 FRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPG--SGLAYLLADAC--HDVWLSNTRG 401
F +S QR SR+ GLL + + + G S Y L C D++LS+ G
Sbjct: 10 FNLSKTQRSSRSSGLKAQGSGLLHALLNQKEKGASVISNANYFLTLTCVLQDLYLSSCHG 69
Query: 402 NYYSRRHL 425
N Y R L
Sbjct: 70 NEYGHRDL 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,336,230
Number of Sequences: 27780
Number of extensions: 287482
Number of successful extensions: 958
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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