Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16i23
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 133 1e-31
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 133 1e-31
U80026-1|AAC25844.1| 355|Caenorhabditis elegans Fucosyl transfe... 33 0.19
Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical pr... 28 7.1
L23649-4|AAA27908.2| 344|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 133 bits (321), Expect = 1e-31
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Frame = +3
Query: 207 PSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKW 383
PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F P RKW
Sbjct: 74 PSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGVPHRKW 133
Query: 384 ATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVF 563
A LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF Q F
Sbjct: 134 AALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQFGGQAF 193
Query: 564 TVGQQLAFLFQEKK-----VLSLIVKNLEAVDVQALAAGAN 671
+ G Q+AF F++K+ LSL+VK++E D+ AA A+
Sbjct: 194 SKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAAS 234
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 133 bits (321), Expect = 1e-31
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Frame = +3
Query: 207 PSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKW 383
PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F P RKW
Sbjct: 74 PSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGVPHRKW 133
Query: 384 ATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVF 563
A LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF Q F
Sbjct: 134 AALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQFGGQAF 193
Query: 564 TVGQQLAFLFQEKK-----VLSLIVKNLEAVDVQALAAGAN 671
+ G Q+AF F++K+ LSL+VK++E D+ AA A+
Sbjct: 194 SKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAAS 234
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 133 bits (321), Expect = 1e-31
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 6/161 (3%)
Frame = +3
Query: 207 PSDELAITNCALIHQDDFPS-DIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKW 383
PS+E + N A +++ DF IKH+ V+ GP+ H++FSIR + G + F P RKW
Sbjct: 8 PSEEHTLANYAYVNRSDFDDKQIKHVRVNPGPAHHYIFSIRNDGSIKPGEIAFGVPHRKW 67
Query: 384 ATLSIGQTIDVKPFKPSSAECLCSVTLEADFMMKKTTSTDPYDSEQMARDFLIQFANQVF 563
A LS+ Q + V PF +E + S+ L ADF KK +++P +++ MAR+F IQF Q F
Sbjct: 68 AALSLDQEVRVTPFTFQQSEYVGSMILTADFNAKKNVTSEPLNADLMAREFSIQFGGQAF 127
Query: 564 TVGQQLAFLFQEKK-----VLSLIVKNLEAVDVQALAAGAN 671
+ G Q+AF F++K+ LSL+VK++E D+ AA A+
Sbjct: 128 SKGMQMAFRFEDKEKNKTHTLSLVVKSIEGFDIGKAAAAAS 168
>U80026-1|AAC25844.1| 355|Caenorhabditis elegans Fucosyl
transferase protein 2 protein.
Length = 355
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 213 DELAITNCALIHQDDFPSDIKHIEVSTGPSQHFVFSIRFYNGVDRGTVGFSAPQRKWATL 392
DEL NC I + D+ +D H E S S + +I + + + G V + KW
Sbjct: 200 DELRFKNCVHIRRGDYVNDFDHAETS---SYFTIRAIDYVHTLHPGLVYLISDDPKWVRK 256
Query: 393 SIGQTID 413
I + +D
Sbjct: 257 QIAEHLD 263
>Z46787-9|CAA86747.1| 274|Caenorhabditis elegans Hypothetical
protein C16C10.9 protein.
Length = 274
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 491 CFLHHEIGFQRYAAKAFSTRGFERLHVN 408
C L H++GFQ + A++F +RL N
Sbjct: 224 CILMHQLGFQEWTAESFDVIVVDRLRRN 251
>Z37139-6|CAB63431.2| 591|Caenorhabditis elegans Hypothetical
protein C14B1.10 protein.
Length = 591
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 484 RKQHQRIHMIRNKWPEISLFSSPIKFLLSDNS 579
+K H+ I ++ P++ + + P K+LL NS
Sbjct: 22 KKVHKSIEQLKRHDPDVQISTEPTKYLLVSNS 53
>L23649-4|AAA27908.2| 344|Caenorhabditis elegans Hypothetical
protein C02C2.5 protein.
Length = 344
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = -1
Query: 317 EHKVLRWSCRYFNMLDVTWKVILMY*STVGD----GKLIRWTF 201
E +R SCR F+ DV KVI T G G L WTF
Sbjct: 149 EEMKMRRSCRQFSSRDVPLKVIQNLLKTAGTSPSVGNLQPWTF 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,570,305
Number of Sequences: 27780
Number of extensions: 318889
Number of successful extensions: 732
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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