Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16i19
(660 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051518-1|AAK92942.1| 478|Drosophila melanogaster GH17311p pro... 68 1e-11
AE014298-1225|AAF46409.1| 478|Drosophila melanogaster CG1785-PA... 68 1e-11
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 32 0.79
BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p pro... 31 1.0
AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19 ... 31 1.0
AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14 ... 31 1.0
AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-P... 31 1.0
AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-P... 31 1.0
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 30 3.2
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ... 29 4.2
X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein. 29 5.6
BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p pro... 29 5.6
AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA... 29 5.6
AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA... 29 7.4
BT015266-1|AAT94495.1| 459|Drosophila melanogaster LD33831p pro... 28 9.8
AY071474-1|AAL49096.1| 390|Drosophila melanogaster RE54950p pro... 28 9.8
AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1 p... 28 9.8
>AY051518-1|AAK92942.1| 478|Drosophila melanogaster GH17311p
protein.
Length = 478
Score = 68.1 bits (159), Expect = 1e-11
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3
Query: 111 AWRKHCDIKDVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKL 290
AWRK DI+DVE FLEDQR EER+G F K D ++F++D+ K +S+K+
Sbjct: 20 AWRK-TDIQDVEQFLEDQRQEERVGTFADKQDEDLFVVDSSLPKTKA-----TVLSVKQK 73
Query: 291 RRSKLGEFPKCFEILLPDSKVQDPNTKRNTIK 386
R+ + + ++ L SKVQDP KRN ++
Sbjct: 74 RKLNAKKPMRSYQALENTSKVQDPIAKRNHVR 105
>AE014298-1225|AAF46409.1| 478|Drosophila melanogaster CG1785-PA
protein.
Length = 478
Score = 68.1 bits (159), Expect = 1e-11
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3
Query: 111 AWRKHCDIKDVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKL 290
AWRK DI+DVE FLEDQR EER+G F K D ++F++D+ K +S+K+
Sbjct: 20 AWRK-TDIQDVEQFLEDQRQEERVGTFADKQDEDLFVVDSSLPKTKA-----TVLSVKQK 73
Query: 291 RRSKLGEFPKCFEILLPDSKVQDPNTKRNTIK 386
R+ + + ++ L SKVQDP KRN ++
Sbjct: 74 RKLNAKKPMRSYQALENTSKVQDPIAKRNHVR 105
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 31.9 bits (69), Expect = 0.79
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Frame = +3
Query: 141 VENFLEDQRLEERLGKFETKPDSEIFII------DTGGDGIKTEDKDIKPISLKKLRRSK 302
++ ED +EE+ K ETK I + + I T + K
Sbjct: 1076 LDQIKEDLVIEEKYVKEETKEAEAIVVATVQTLPEAAPLAIDTILASATKDAPKDANAEA 1135
Query: 303 LGEFPKCFEILLPDSKVQDPNTKRNTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARR 482
LGE P E +LP + ++N ++ V P + L + + G+Y+K +DA
Sbjct: 1136 LGELPDSGERVLPMKMTFE--AQQNLLRDVIKTPDEVADLPVHEEADLGLYEKDSQDA-- 1191
Query: 483 NRKMALQKKRRAKQVRQ 533
N K K+ AK+ ++
Sbjct: 1192 NAKSISHKEESAKEEKE 1208
>BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p
protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.0
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 92 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 150
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 151 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 210
Query: 474 ARRNRKMALQKK--------RRAKQVRQN 536
A + R+ LQKK RRA+ VRQN
Sbjct: 211 AEQKREKELQKKIEKVQKLERRAELVRQN 239
>AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19
protein.
Length = 254
Score = 31.5 bits (68), Expect = 1.0
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 89 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 147
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 148 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 207
Query: 474 ARRNRKMALQKK--------RRAKQVRQN 536
A + R+ LQKK RRA+ VRQN
Sbjct: 208 AEQKREKELQKKIEKVQKLERRAELVRQN 236
>AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14
protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.0
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 92 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 150
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 151 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 210
Query: 474 ARRNRKMALQKK--------RRAKQVRQN 536
A + R+ LQKK RRA+ VRQN
Sbjct: 211 AEQKREKELQKKIEKVQKLERRAELVRQN 239
>AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-PB,
isoform B protein.
Length = 302
Score = 31.5 bits (68), Expect = 1.0
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 137 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 195
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 196 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 255
Query: 474 ARRNRKMALQKK--------RRAKQVRQN 536
A + R+ LQKK RRA+ VRQN
Sbjct: 256 AEQKREKELQKKIEKVQKLERRAELVRQN 284
>AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-PC,
isoform C protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.0
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 16/149 (10%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 92 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 150
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 151 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 210
Query: 474 ARRNRKMALQKK--------RRAKQVRQN 536
A + R+ LQKK RRA+ VRQN
Sbjct: 211 AEQKREKELQKKIEKVQKLERRAELVRQN 239
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 573 NLVNLCPKGPN*NSVALVLLASSFAMPFSCSC 478
N+ N C K P +S AL +L+S ++ +SC C
Sbjct: 4162 NISNPCAKDPCKSSRALCILSSESSVGYSCKC 4193
>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
protein.
Length = 5412
Score = 29.5 bits (63), Expect = 4.2
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 6/137 (4%)
Frame = +3
Query: 141 VENFLEDQRLEERLGKFETKPDSEIFII------DTGGDGIKTEDKDIKPISLKKLRRSK 302
++ ED +EE+ K ETK I + + I T + K
Sbjct: 1123 LDQIKEDLVIEEKYVKEETKEAEAIVVATVQTLPEAAPLAIDTILASATKDAPKDANAEA 1182
Query: 303 LGEFPKCFEILLPDSKVQDPNTKRNTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARR 482
LGE P E +LP + ++N ++ V P + L + + G+Y+K +DA
Sbjct: 1183 LGELPDSGERVLPMKMTFE--AQQNLLRDVIKTPDEVADLPVHEEADLGLYEKDSQDA-- 1238
Query: 483 NRKMALQKKRRAKQVRQ 533
K K+ AK+ ++
Sbjct: 1239 GAKSISHKEESAKEEKE 1255
>X68408-1|CAA48471.1| 723|Drosophila melanogaster SSRP1 protein.
Length = 723
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +3
Query: 342 DSKVQDPNTKRNTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAK 521
DS V+ + + G K +K+ +K +KK ++ R +K + +KK K
Sbjct: 495 DSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKEKERTKKPSKKKKDSGK 554
Query: 522 QVRQNFNLDLWGKDLPDS 575
R LW D +S
Sbjct: 555 PKRATTAFMLWLNDTRES 572
>BT004831-1|AAO45187.1| 723|Drosophila melanogaster SD06504p
protein.
Length = 723
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +3
Query: 342 DSKVQDPNTKRNTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAK 521
DS V+ + + G K +K+ +K +KK ++ R +K + +KK K
Sbjct: 495 DSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKEKERTKKPSKKKKDSGK 554
Query: 522 QVRQNFNLDLWGKDLPDS 575
R LW D +S
Sbjct: 555 PKRATTAFMLWLNDTRES 572
>AE013599-3689|AAF47064.1| 723|Drosophila melanogaster CG4817-PA
protein.
Length = 723
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = +3
Query: 342 DSKVQDPNTKRNTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQKKRRAK 521
DS V+ + + G K +K+ +K +KK ++ R +K + +KK K
Sbjct: 495 DSNVESDSDDDSDASGGGGDSDGAKKKKEKKSEKKEKKEKKHKEKERTKKPSKKKKDSGK 554
Query: 522 QVRQNFNLDLWGKDLPDS 575
R LW D +S
Sbjct: 555 PKRATTAFMLWLNDTRES 572
>AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA
protein.
Length = 607
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 429 KRKYEKGIYQKKIEDARRNRKMALQKKRRAKQVRQNFNLDL 551
K K E+ QKK +A++N+ +KK++ + + + DL
Sbjct: 542 KTKSEQAALQKKCAEAKKNKAREAEKKKKTAESERKKDCDL 582
>BT015266-1|AAT94495.1| 459|Drosophila melanogaster LD33831p
protein.
Length = 459
Score = 28.3 bits (60), Expect = 9.8
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 336 LPD-SKVQDPNTKRNTIKP--VGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQK 506
LPD V P + R + +P + + PT KY +G + KI D + + ++
Sbjct: 213 LPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYREG--RVKIAD-----RYSREE 265
Query: 507 KRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCD 602
+ ++ R NL LPD KTI CD
Sbjct: 266 TSKVEEERPKLNLKPRTLPLPDVKTIEFEKCD 297
>AY071474-1|AAL49096.1| 390|Drosophila melanogaster RE54950p
protein.
Length = 390
Score = 28.3 bits (60), Expect = 9.8
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 336 LPD-SKVQDPNTKRNTIKP--VGSKPTAFSKLTDKRKYEKGIYQKKIEDARRNRKMALQK 506
LPD V P + R + +P + + PT KY +G + KI D + + ++
Sbjct: 213 LPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYREG--RVKIAD-----RYSREE 265
Query: 507 KRRAKQVRQNFNLDLWGKDLPDSKTIPSTLCD 602
+ ++ R NL LPD KTI CD
Sbjct: 266 TSKVEEERPKLNLKPRTLPLPDVKTIEFEKCD 297
>AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1
protein.
Length = 234
Score = 28.3 bits (60), Expect = 9.8
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 8/132 (6%)
Frame = +3
Query: 138 DVENFLEDQRLEERLGKFETKPDSEIFIIDTGGDGIKTEDKDIKPISLKKLRRSKLGEFP 317
++ N Q E+ K E + II + +K +DI+ + + L + K E
Sbjct: 92 EITNEFITQTKEQLESKMELHVEKREAIISDMKEKLKIHAQDIEK-TRETLEQQKANEQK 150
Query: 318 KCFEILLPDSKVQDPNTKR--------NTIKPVGSKPTAFSKLTDKRKYEKGIYQKKIED 473
E L ++D N K+ NTIK K K + + IY+ K+
Sbjct: 151 AIEEKLKIAQSLRDENIKKMLDRLKEHNTIKIAEIKSQNDQLECQKIEEKARIYENKLFA 210
Query: 474 ARRNRKMALQKK 509
A + R+ LQKK
Sbjct: 211 AEQKREKELQKK 222
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,152,193
Number of Sequences: 53049
Number of extensions: 521493
Number of successful extensions: 1846
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -