Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16i15
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 63 1e-09
AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase p... 38 0.055
U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein couple... 31 3.6
CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled recep... 31 3.6
BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled recep... 31 3.6
BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled recep... 31 3.6
BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coup... 31 3.6
BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled recep... 31 3.6
AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein. 31 3.6
AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled recep... 31 3.6
AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled recep... 31 3.6
AK223223-1|BAD96943.1| 457|Homo sapiens G protein-coupled recep... 31 3.6
AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein. 31 3.6
AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activatin... 31 3.6
AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activatin... 31 3.6
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 63.3 bits (147), Expect = 1e-09
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Frame = +2
Query: 233 EYDYIIVGSGTAGSVIAHRIATETNYTYIVLEAGSK----GHGLLDIPVLSPF-----LH 385
EY Y++VG+G+AG V+A R+ + ++LEAG K G L + P L
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLC 99
Query: 386 KSVYDWNYETSPQENACWGMVDHKCRLPQGKIVGGSSKLNNMVHVRGNISHYAVW 550
Y+W Y T Q G+ P+G++ GGSS LN MV+VRG+ Y W
Sbjct: 100 DDRYNWCYHTEVQR----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERW 150
>AJ272267-1|CAB75961.1| 482|Homo sapiens choline dehydrogenase
protein.
Length = 482
Score = 37.5 bits (83), Expect = 0.055
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 467 PQGKIVGGSSKLNNMVHVRGNISHYAVW 550
P+G++ GGSS LN MV+VRG+ Y W
Sbjct: 11 PRGRVWGGSSSLNAMVYVRGHAEDYERW 38
>U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AK223223-1|BAD96943.1| 457|Homo sapiens G protein-coupled receptor
89 variant protein.
Length = 457
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activating
protein protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activating
protein protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 321 YWKQEARVMAYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 452
+WK V+ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,075,026
Number of Sequences: 237096
Number of extensions: 2642178
Number of successful extensions: 3880
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3879
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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