Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16i15
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    66   4e-13
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         28   0.086
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    28   0.086
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    28   0.086
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    25   0.61 
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   4.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.7  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    22   5.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   7.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   7.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   7.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 66.1 bits (154), Expect = 4e-13
 Identities = 34/108 (31%), Positives = 56/108 (51%)
 Frame = +2

Query: 227 ETEYDYIIVGSGTAGSVIAHRIATETNYTYIVLEAGSKGHGLLDIPVLSPFLHKSVYDWN 406
           +  YD+I+VG G A +V+A R++  +N+  ++LEAG       +IP           DW 
Sbjct: 66  DLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIPSNLQLYLGGDLDWK 125

Query: 407 YETSPQENACWGMVDHKCRLPQGKIVGGSSKLNNMVHVRGNISHYAVW 550
           Y T+ + +AC       C  P+GK +GG++  + M + RG+   Y  W
Sbjct: 126 YYTTNESHACLS-TGGSCYWPRGKNLGGTTLHHGMAYHRGHRKDYERW 172


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 194 DIFASIYLKTVETEYDYII---VGSGTAGSVIAHRIATETNYTYIVLEAGSKGHGLL 355
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 194 DIFASIYLKTVETEYDYII---VGSGTAGSVIAHRIATETNYTYIVLEAGSKGHGLL 355
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +2

Query: 194 DIFASIYLKTVETEYDYII---VGSGTAGSVIAHRIATETNYTYIVLEAGSKGHGLL 355
           D+  S  LK VE  +D  +    G G   S+    +   TN   +V  A  KG GL+
Sbjct: 158 DLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCNTNSDTMVYIADEKGEGLI 214


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 179 IIYYSDIFASIYLKTVETEYDYIIVGSGTAGSV 277
           + +Y      I+ K  E + DY++ G+GT G++
Sbjct: 189 LAHYDQTAIEIW-KQCEGKIDYLVAGAGTGGTI 220


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 569 LSIFCGTRLHNVKCCLGHVPCYLIWMIPQLFCLEGVCIYG 450
           L  +  T++H V      V  YL++ + Q+F L   CI+G
Sbjct: 141 LLAYQATKIHAVDTYAASVVGYLLYSLGQVFML---CIFG 177


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = +2

Query: 182 IYYSDIFASIYLKTVETEYDYIIVGSGTAGSVIAHRIATETNYTYIV 322
           ++  D+  S  LK VE  +D    G G   S+    + +     Y+V
Sbjct: 159 LFAFDLNTSQLLKQVEIPHDVATTGKGELVSLTVQAMDSTNTMVYMV 205


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 690 KNPSSVAAFKTESASLLSYCKS 625
           KNP ++ AF +     L YC S
Sbjct: 399 KNPDAIPAFLSSLFLWLGYCNS 420


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 667 CCY*TWVLSPL 699
           C Y TWVL PL
Sbjct: 113 CYYETWVLGPL 123


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
 Frame = +1

Query: 253 WIW--HSWLRNSTSHSHRD*LHIYS 321
           WIW  H W+R +  +      H Y+
Sbjct: 176 WIWTPHGWMRRNVLNKQHVHFHDYT 200


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 667 CCY*TWVLSPL 699
           C Y TWVL PL
Sbjct: 79  CYYETWVLGPL 89


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 515 HVRGNISHYAVWFHRKYSNDYIK 583
           HV   I H  +++H++ S D+ +
Sbjct: 5   HVVRGIEHGGLYYHQRCSRDWFR 27


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 274 RNSTSHSHRD 303
           RN+T+HSH D
Sbjct: 3   RNTTNHSHHD 12


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 620  LDDLQYESKLADSVLNAATELGFFHLSRL*NIRISI 727
            LD++    ++    L A    G F LS + N+ +S+
Sbjct: 1334 LDEVDISMEVPSDALIALYSQGLFSLSEIDNLDVSL 1369


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 464 VCIYGQPCPSKHFPV 420
           VC+  + CP +H PV
Sbjct: 103 VCVCMRKCPRRHRPV 117


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 244 YYCWIWHSWLRNSTSHSHR 300
           +YC  W+++  N TS  H+
Sbjct: 10  HYCLRWNNYQSNMTSVFHQ 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,774
Number of Sequences: 438
Number of extensions: 5442
Number of successful extensions: 33
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)