Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16h13
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VI...    59   6e-09
X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc ...    54   2e-07
BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase su...    54   2e-07
BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase su...    54   2e-07
BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase su...    54   2e-07
AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase su...    54   2e-07
BC104924-1|AAI04925.1|  333|Homo sapiens G protein-coupled recep...    29   4.4  
BC104922-1|AAI04923.1|  333|Homo sapiens putative purinergic rec...    29   4.4  
AY242133-1|AAO92300.1|  333|Homo sapiens putative purinergic rec...    29   4.4  
AL590222-1|CAD13458.1|  333|Homo sapiens G protein-coupled recep...    29   4.4  
AB083599-1|BAB89312.1|  333|Homo sapiens putative G-protein coup...    29   4.4  

>AF136170-1|AAP97260.1|   63|Homo sapiens cytochrome c oxidase VIIc
           protein.
          Length = 63

 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 292
           R   T+ VR +H   G PG+NLPF + N+++L     +Y GSG +AP+ I RHQLLKK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK 63


>X16560-1|CAA34559.1|   63|Homo sapiens protein ( Human COX VIIc
           gene for subunit VIIc of cytochrome c oxidase (EC
           1.9.3.1).  ).
          Length = 63

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 289
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BT007098-1|AAP35762.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 289
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BC007498-1|AAH07498.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 289
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BC001005-1|AAH01005.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc protein.
          Length = 63

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 289
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>AF067639-1|AAC73062.1|   63|Homo sapiens cytochrome c oxidase
           subunit VIIc precursor protein.
          Length = 63

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 122 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 289
           R   T+ VR +H   G PG+NLPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 7   RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>BC104924-1|AAI04925.1|  333|Homo sapiens G protein-coupled receptor
           174 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 180 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANSTVG 7
           F PG+    ++L K+V  +    F + ++ V  F FL +  R+H  KQK+D   S  G
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141


>BC104922-1|AAI04923.1|  333|Homo sapiens putative purinergic
           receptor FKSG79 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 180 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANSTVG 7
           F PG+    ++L K+V  +    F + ++ V  F FL +  R+H  KQK+D   S  G
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141


>AY242133-1|AAO92300.1|  333|Homo sapiens putative purinergic
           receptor protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 180 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANSTVG 7
           F PG+    ++L K+V  +    F + ++ V  F FL +  R+H  KQK+D   S  G
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141


>AL590222-1|CAD13458.1|  333|Homo sapiens G protein-coupled receptor
           174 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 180 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANSTVG 7
           F PG+    ++L K+V  +    F + ++ V  F FL +  R+H  KQK+D   S  G
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141


>AB083599-1|BAB89312.1|  333|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -2

Query: 180 FSPGIPPLEWFLTKFVTTFLPNLFEMRVNGVIIFTFLRFSSRYHSKKQKFDFANSTVG 7
           F PG+    ++L K+V  +    F + ++ V  F FL +  R+H  KQK+D   S  G
Sbjct: 86  FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,997,623
Number of Sequences: 237096
Number of extensions: 1114591
Number of successful extensions: 1990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1990
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)