Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16f19
(613 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 27 0.19
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.33
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.5
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.5
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 26.6 bits (56), Expect = 0.19
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 509 NYGNNNDHGFQEE-FEEGNNRPEIHDERGRGRGRG 610
N G N+ F +E + + N++ +E GRG+GRG
Sbjct: 51 NSGTINESEFNDENYWQCNDKKTDIEETGRGKGRG 85
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.8 bits (54), Expect = 0.33
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +3
Query: 219 VIILLLKNSMITSYNTGK*MGL*LIEILDLCNSPKNQVHRMQ*KKLMVAYSKEKISLSEP 398
+I+L L +M+T + L ++ILDL N N + R++ + Y+ + LS+
Sbjct: 337 LIVLNLSYNMLTHIDARMFKDLFFLQILDLRN---NSIDRIESNAFLPLYNLHTLELSDN 393
Query: 399 QL 404
+L
Sbjct: 394 KL 395
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 2.4
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 484 FHLSVF*CNSRWHFWIYRYGFNISSFISCGSDR-DIFSFEYATISFFYCIL 335
FH+ + NS+W F + + + + C +D + +E+ +IS Y IL
Sbjct: 206 FHMDGYTNNSKWDFKVIKATKVLKMYACCPNDTYPMIVYEF-SISRHYGIL 255
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2
Query: 503 YDNYGNNNDH 532
Y+NY NNN++
Sbjct: 94 YNNYNNNNNY 103
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = +2
Query: 512 YGNNNDHGFQEEFEEG 559
YGN N +GF ++++G
Sbjct: 223 YGNYNINGFNFQWKDG 238
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 503 YDNYGNNNDHGFQEE 547
Y+NY NNN + + ++
Sbjct: 330 YNNYNNNNYNNYNKK 344
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = +2
Query: 503 YDNYGNNNDHGFQE 544
Y+NY NNN + +++
Sbjct: 338 YNNYNNNNYNNYKK 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,264
Number of Sequences: 438
Number of extensions: 3853
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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