Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16f08
(646 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 28 0.067
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 24 1.1
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 24 1.1
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 24 1.1
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 24 1.4
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.3
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 5.8
DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein ... 21 7.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.7
AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein ... 21 7.7
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 28.3 bits (60), Expect = 0.067
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 467 VSTKLVTIVPPVATASMKRSVVNMYQFTEYAVVT 366
V+T L TI+PPV S ++S + Q + +VT
Sbjct: 959 VTTNLTTILPPVKVQSQQQSQQSQQQQQQQTIVT 992
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 203 LPCLYLCCHYSVVNTCVV 256
L C LCC S++N C +
Sbjct: 113 LTCDVLCCTASILNLCAI 130
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 203 LPCLYLCCHYSVVNTCVV 256
L C LCC S++N C +
Sbjct: 113 LTCDVLCCTASILNLCAI 130
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 203 LPCLYLCCHYSVVNTCVV 256
L C LCC S++N C +
Sbjct: 113 LTCDVLCCTASILNLCAI 130
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 23.8 bits (49), Expect = 1.4
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 126 PKLHFDQCEEYLGLERLALQ 185
P LH DQ EEY ++++ ++
Sbjct: 249 PPLHADQAEEYKKIQQILIR 268
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 289 LSSNFN*RFGRRTPFLVAVFLQLISGVTTAYSVNWYMFTTL 411
LS+ +N +PF + FL+ ++ + + S+ W TL
Sbjct: 462 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 502
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 289 LSSNFN*RFGRRTPFLVAVFLQLISGVTTAYSVNWYMFTTL 411
LS+ +N +PF + FL+ ++ + + S+ W TL
Sbjct: 500 LSAAYNVELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 540
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = +1
Query: 532 LGHLSLPLFGYYLRNWSNFQLAISLPSVLFLSYYFLL 642
+G L + +YL + S ++++S+ +L L+ +FLL
Sbjct: 252 MGISFLTVLVFYLPSDSGEKVSLSISILLSLTVFFLL 288
>DQ855485-1|ABH88172.1| 128|Apis mellifera chemosensory protein 4
protein.
Length = 128
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 485 LNTERLLESFTRYLL 529
LNTERLL ++ LL
Sbjct: 37 LNTERLLNAYVNCLL 51
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 547 LPLFGYYLRNWSNFQLAISLPSVLFLSYYFLL 642
L + +YL + S ++++S+ +L L+ +FLL
Sbjct: 253 LSVLVFYLPSDSGEKVSLSISILLSLTVFFLL 284
>AJ973400-1|CAJ01447.1| 128|Apis mellifera hypothetical protein
protein.
Length = 128
Score = 21.4 bits (43), Expect = 7.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 485 LNTERLLESFTRYLL 529
LNTERLL ++ LL
Sbjct: 37 LNTERLLNAYVNCLL 51
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,639
Number of Sequences: 438
Number of extensions: 3469
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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