Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e23
         (250 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5N6Y2 Cluster: Transposase; n=2; Clostridium kluyveri ...    33   1.6  
UniRef50_Q4CZA6 Cluster: Putative uncharacterized protein; n=1; ...    33   1.6  
UniRef50_A6RGJ1 Cluster: Predicted protein; n=1; Ajellomyces cap...    31   6.5  
UniRef50_Q8IHR9 Cluster: Putative uncharacterized protein; n=1; ...    30   8.5  
UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2; ...    30   8.5  

>UniRef50_A5N6Y2 Cluster: Transposase; n=2; Clostridium kluyveri DSM
           555|Rep: Transposase - Clostridium kluyveri DSM 555
          Length = 235

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 90  PKRIFMSISTDSCHSCYICQRRLCVRPFRSCVVNEYG 200
           PK++       SC   ++CQ + CVRP + C   + G
Sbjct: 60  PKKVLQCAHFKSCQMRFLCQNKDCVRPCKLCYDTKLG 96


>UniRef50_Q4CZA6 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma cruzi|Rep: Putative uncharacterized protein -
            Trypanosoma cruzi
          Length = 4345

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 64   GPVLELYNFLNASLCQYQLTAVTLVIYVNVVCVC 165
            G  ++L   L+AS+  Y +T V LV YVN++ VC
Sbjct: 3756 GQTIQLQFTLDASMINYPVTRVKLVPYVNLLTVC 3789


>UniRef50_A6RGJ1 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 964

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 93  KRIFMSISTDSCHSCYICQRRLCVRPFRSC 182
           KR++  + + SC +C+ C RR    P  SC
Sbjct: 409 KRLWRQLESSSCSTCFGCLRRSSQHPMPSC 438


>UniRef50_Q8IHR9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 660

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -2

Query: 180 KNERGAHTNDVDIYNKSDSC 121
           KNE+  + +D++IYN SD C
Sbjct: 318 KNEKNQNIDDIEIYNNSDKC 337


>UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 6648

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = +1

Query: 82   YNFLNASLCQYQLTAVTLVIYVNVVCVCAPFVLASSMSTDTKYCIADRINTIHKK 246
            Y++++ SL +Y+L+ V +  +   VC      +    +T+T+Y I D +NT  K+
Sbjct: 4446 YSYIDLSLFRYKLSWVLIDFFFYPVCKKLTIPMNIHFNTNTEY-IEDLLNTFSKE 4499


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,347,587
Number of Sequences: 1657284
Number of extensions: 3320075
Number of successful extensions: 8362
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8360
length of database: 575,637,011
effective HSP length: 61
effective length of database: 474,542,687
effective search space used: 9965396427
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)