Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e23
         (250 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021315-1|AAX33463.1|  808|Drosophila melanogaster RE10908p pro...    29   0.86 
AE013599-3441|AAF46883.2|  144|Drosophila melanogaster CG30269-P...    29   0.86 
AE013599-1874|AAF58258.1|  808|Drosophila melanogaster CG8613-PA...    29   0.86 
AE014296-3689|AAZ66077.2|  244|Drosophila melanogaster CG33772-P...    27   4.6  
BT003470-1|AAO39473.1|  506|Drosophila melanogaster RE70685p pro...    26   6.1  
AY094898-1|AAM11251.1|  696|Drosophila melanogaster RE73081p pro...    26   8.0  
AJ251892-1|CAB64381.1|  785|Drosophila melanogaster LIM-domain p...    26   8.0  
AE013599-304|AAM68907.1|  785|Drosophila melanogaster CG12833-PB...    26   8.0  
AE013599-303|AAF59292.2|  785|Drosophila melanogaster CG12833-PA...    26   8.0  

>BT021315-1|AAX33463.1|  808|Drosophila melanogaster RE10908p
           protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 93  KRIFMSISTDSCHSCYICQRRLCVRPFRSCVVNE 194
           K IF+S+   +CH C++ +      P  + ++NE
Sbjct: 113 KIIFLSVGYSTCHWCHVMEHESFENPETAAIMNE 146


>AE013599-3441|AAF46883.2|  144|Drosophila melanogaster CG30269-PA
           protein.
          Length = 144

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +1

Query: 118 LTAVTLVIYVNVVCVCAPFVLASSMSTDTKYC-IADR-INTIHKK 246
           L A+ L ++    CVC P+ ++S M+T+  YC + DR + T  +K
Sbjct: 101 LIALILCLFQLYCCVCLPYCISSCMNTN-HYCGMCDRYLGTYDRK 144


>AE013599-1874|AAF58258.1|  808|Drosophila melanogaster CG8613-PA
           protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 0.86
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 93  KRIFMSISTDSCHSCYICQRRLCVRPFRSCVVNE 194
           K IF+S+   +CH C++ +      P  + ++NE
Sbjct: 113 KIIFLSVGYSTCHWCHVMEHESFENPETAAIMNE 146


>AE014296-3689|AAZ66077.2|  244|Drosophila melanogaster CG33772-PA
           protein.
          Length = 244

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 112 IDIKMRLGNYTILTLALKRSLHFNSLQYL 26
           +DIKM+L  Y + TL    SL  ++L +L
Sbjct: 198 VDIKMKLRRYQVATLKGNESLKSSNLHWL 226


>BT003470-1|AAO39473.1|  506|Drosophila melanogaster RE70685p
           protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 87  FPKRIFMSISTDSCHSCYICQRRLCVR 167
           +P  I       SC  C  C+RR CV+
Sbjct: 404 WPSHILQRAQDQSCGGCLHCRRRGCVQ 430


>AY094898-1|AAM11251.1|  696|Drosophila melanogaster RE73081p
           protein.
          Length = 696

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 114 STDSCHSCYICQRRLCVRPF 173
           +TD C SC  C+  L  RPF
Sbjct: 392 ATDQCFSCCTCRCSLLGRPF 411


>AJ251892-1|CAB64381.1|  785|Drosophila melanogaster LIM-domain
           protein protein.
          Length = 785

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 114 STDSCHSCYICQRRLCVRPF 173
           +TD C SC  C+  L  RPF
Sbjct: 392 ATDQCFSCCTCRCSLLGRPF 411


>AE013599-304|AAM68907.1|  785|Drosophila melanogaster CG12833-PB,
           isoform B protein.
          Length = 785

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 114 STDSCHSCYICQRRLCVRPF 173
           +TD C SC  C+  L  RPF
Sbjct: 392 ATDQCFSCCTCRCSLLGRPF 411


>AE013599-303|AAF59292.2|  785|Drosophila melanogaster CG12833-PA,
           isoform A protein.
          Length = 785

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 114 STDSCHSCYICQRRLCVRPF 173
           +TD C SC  C+  L  RPF
Sbjct: 392 ATDQCFSCCTCRCSLLGRPF 411


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,366,726
Number of Sequences: 53049
Number of extensions: 154938
Number of successful extensions: 365
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)