Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e09
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   2.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   3.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   6.1  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.1  

>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -2

Query: 569 VSNLSGWWQ*NMTLNGPRAIFKNGIHNEIESQKIKS 462
           + N   WW        P  I+KN   +E++++ I S
Sbjct: 92  IKNKRDWWNELEAKYDPTGIYKNKYADELKAEGIVS 127


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 119 RTSSFTVQCKQGWRTTIANI 60
           + ++F   CK+GW   + NI
Sbjct: 86  KINAFQCICKEGWEGALCNI 105


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = -2

Query: 569 VSNLSGWWQ*NMTLNGPRAIFKNGIHNEIESQKI 468
           + N   WW        P  I+KN   +E++++ I
Sbjct: 92  IKNKRDWWNELEAKYDPTGIYKNKYADELKAEGI 125


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 714 VFDTLESILVYPSCVFTV 661
           +FD +   LVY +CV++V
Sbjct: 1   MFDKIILCLVYATCVYSV 18


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/30 (23%), Positives = 15/30 (50%)
 Frame = -2

Query: 551 WWQ*NMTLNGPRAIFKNGIHNEIESQKIKS 462
           WW+       P+ I+K    N ++ + +K+
Sbjct: 95  WWEQLQKKFDPQGIYKKRYQNYLDKEGLKA 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,377
Number of Sequences: 336
Number of extensions: 4482
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)