SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e09
         (759 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK075172-1|BAC11449.1|  416|Homo sapiens protein ( Homo sapiens ...   191   3e-48
BC017876-1|AAH17876.1|  416|Homo sapiens asparagine-linked glyco...   190   4e-48
AL137067-1|CAC07999.1|  416|Homo sapiens asparagine-linked glyco...   190   4e-48
AK074704-1|BAC11150.1|  416|Homo sapiens protein ( Homo sapiens ...   190   4e-48
AK027417-1|BAB55099.1|  416|Homo sapiens protein ( Homo sapiens ...   190   4e-48
AB161356-1|BAD11905.1|  416|Homo sapiens asparagine-linked glyco...   190   4e-48
AY358697-1|AAQ89060.1|  323|Homo sapiens PLLK666 protein.             109   1e-23
AK074988-1|BAC11337.1|  323|Homo sapiens protein ( Homo sapiens ...   109   1e-23
X85018-1|CAA59380.1|  559|Homo sapiens UDP-GalNAc:polypeptide N-...    31   4.5  
U41514-1|AAC50327.1|  559|Homo sapiens UDP-GalNAc:polypeptide N-...    31   4.5  
BC038440-1|AAH38440.1|  499|Homo sapiens GALNT1 protein protein.       31   4.5  

>AK075172-1|BAC11449.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90691 fis, clone PLACE1006290, weakly similar to
           GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
          Length = 416

 Score =  191 bits (465), Expect = 3e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSRFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>BC017876-1|AAH17876.1|  416|Homo sapiens asparagine-linked
           glycosylation 2 homolog (S. cerevisiae,
           alpha-1,3-mannosyltra protein.
          Length = 416

 Score =  190 bits (464), Expect = 4e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>AL137067-1|CAC07999.1|  416|Homo sapiens asparagine-linked
           glycosylation 2 homolog (S. cerevisiae,
           alpha-1,3-mannosyltra protein.
          Length = 416

 Score =  190 bits (464), Expect = 4e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>AK074704-1|BAC11150.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90223 fis, clone NT2RM1000580, weakly similar to
           GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
          Length = 416

 Score =  190 bits (464), Expect = 4e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>AK027417-1|BAB55099.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14511 fis, clone NT2RM1000648, weakly similar to
           GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
          Length = 416

 Score =  190 bits (464), Expect = 4e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>AB161356-1|BAD11905.1|  416|Homo sapiens asparagine-linked
           glycosylation 2 protein.
          Length = 416

 Score =  190 bits (464), Expect = 4e-48
 Identities = 89/194 (45%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
 Frame = +1

Query: 178 ILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVVGDW 357
           +LFLHPDLG+GGAERLV+DAALA Q +G  V  +T H+DP HCFAE+R+    V   GDW
Sbjct: 17  VLFLHPDLGVGGAERLVLDAALALQARGCSVKIWTAHYDPGHCFAESRE--LPVRCAGDW 74

Query: 358 IPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPFRVI 537
           +PR +    +                     +EE  ++ CD +S CIP  ++AR   +++
Sbjct: 75  LPRGLGWGGRGAAVCAYVRMVFLALYVLFLADEEFDVVVCDQVSACIPVFRLARRRKKIL 134

Query: 538 FYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSIKDI 717
           FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVNS++TA V+++ F+S+  I
Sbjct: 135 FYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVNSQFTAAVFKETFKSLSHI 194

Query: 718 -PDICYPSINTXIF 756
            PD+ YPS+N   F
Sbjct: 195 DPDVLYPSLNVTSF 208


>AY358697-1|AAQ89060.1|  323|Homo sapiens PLLK666 protein.
          Length = 323

 Score =  109 bits (261), Expect = 1e-23
 Identities = 46/92 (50%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +1

Query: 484 ISLCIPFLKMARGPFRVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVN 663
           +S CIP  ++AR   +++FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVN
Sbjct: 24  VSACIPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVN 83

Query: 664 SKYTARVYQDAFQSIKDI-PDICYPSINTXIF 756
           S++TA V+++ F+S+  I PD+ YPS+N   F
Sbjct: 84  SQFTAAVFKETFKSLSHIDPDVLYPSLNVTSF 115


>AK074988-1|BAC11337.1|  323|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90507 fis, clone NT2RP3004133, weakly similar to
           GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
          Length = 323

 Score =  109 bits (261), Expect = 1e-23
 Identities = 46/92 (50%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
 Frame = +1

Query: 484 ISLCIPFLKMARGPFRVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVN 663
           +S CIP  ++AR   +++FYCH PD LLT     LK+LYRAP++W+EE TT  AD +LVN
Sbjct: 24  VSACIPVFRLARRRKKILFYCHFPDLLLTKRDSFLKRLYRAPIDWIEEYTTGMADCILVN 83

Query: 664 SKYTARVYQDAFQSIKDI-PDICYPSINTXIF 756
           S++TA V+++ F+S+  I PD+ YPS+N   F
Sbjct: 84  SQFTAAVFKETFKSLSHIDPDVLYPSLNVTSF 115


>X85018-1|CAA59380.1|  559|Homo sapiens UDP-GalNAc:polypeptide
           N-acetylgalactosaminyl transferase protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -3

Query: 418 HKSYVYRHMQP*IFPKWTG--VSNRQQP*HEMYHHVFRQSNALDRDGLCRKQLRDLSSET 245
           H  +V+R   P  FP  TG  ++   +   E++   F+    +   G+ +    D+SS  
Sbjct: 341 HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRV 400

Query: 244 PMRHRLQ 224
            +RH+LQ
Sbjct: 401 GLRHKLQ 407


>U41514-1|AAC50327.1|  559|Homo sapiens UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase protein.
          Length = 559

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -3

Query: 418 HKSYVYRHMQP*IFPKWTG--VSNRQQP*HEMYHHVFRQSNALDRDGLCRKQLRDLSSET 245
           H  +V+R   P  FP  TG  ++   +   E++   F+    +   G+ +    D+SS  
Sbjct: 341 HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRV 400

Query: 244 PMRHRLQ 224
            +RH+LQ
Sbjct: 401 GLRHKLQ 407


>BC038440-1|AAH38440.1|  499|Homo sapiens GALNT1 protein protein.
          Length = 499

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = -3

Query: 418 HKSYVYRHMQP*IFPKWTG--VSNRQQP*HEMYHHVFRQSNALDRDGLCRKQLRDLSSET 245
           H  +V+R   P  FP  TG  ++   +   E++   F+    +   G+ +    D+SS  
Sbjct: 281 HVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRV 340

Query: 244 PMRHRLQ 224
            +RH+LQ
Sbjct: 341 GLRHKLQ 347


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,508,073
Number of Sequences: 237096
Number of extensions: 2403842
Number of successful extensions: 8257
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8231
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -