Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e09
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071629-1|AAL49251.1|  424|Drosophila melanogaster RE67594p pro...   242   4e-64
AY060893-1|AAL28441.1|  424|Drosophila melanogaster GM04690p pro...   242   4e-64
AE014296-567|AAF47719.1|  424|Drosophila melanogaster CG1291-PA ...   242   4e-64

>AY071629-1|AAL49251.1|  424|Drosophila melanogaster RE67594p
           protein.
          Length = 424

 Score =  242 bits (592), Expect = 4e-64
 Identities = 109/196 (55%), Positives = 138/196 (70%)
 Frame = +1

Query: 169 MVKILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVV 348
           MV++LFLHPDLGIGGAERLVVDAALA +++GH+V+F TNHHD THCF ET DGTF V VV
Sbjct: 1   MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKETADGTFPVHVV 60

Query: 349 GDWIPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPF 528
           GDW+PR + GRF                       E+  ++ CD IS+CIP L+ A    
Sbjct: 61  GDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDVVVCDLISVCIPVLRFAPHRP 120

Query: 529 RVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSI 708
           +V+FYCH PD+LL+S  G+LK+LYR P+NWLEE T   ADKVLVNSK+T RV+QD F+ +
Sbjct: 121 KVLFYCHFPDQLLSSREGLLKRLYRLPINWLEEHTIGLADKVLVNSKFTLRVFQDTFRRL 180

Query: 709 KDIPDICYPSINTXIF 756
             +PD+ YPS++T  F
Sbjct: 181 STVPDVLYPSLHTQYF 196


>AY060893-1|AAL28441.1|  424|Drosophila melanogaster GM04690p
           protein.
          Length = 424

 Score =  242 bits (592), Expect = 4e-64
 Identities = 109/196 (55%), Positives = 138/196 (70%)
 Frame = +1

Query: 169 MVKILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVV 348
           MV++LFLHPDLGIGGAERLVVDAALA +++GH+V+F TNHHD THCF ET DGTF V VV
Sbjct: 1   MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKETADGTFPVHVV 60

Query: 349 GDWIPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPF 528
           GDW+PR + GRF                       E+  ++ CD IS+CIP L+ A    
Sbjct: 61  GDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDVVVCDLISVCIPVLRFAPHRP 120

Query: 529 RVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSI 708
           +V+FYCH PD+LL+S  G+LK+LYR P+NWLEE T   ADKVLVNSK+T RV+QD F+ +
Sbjct: 121 KVLFYCHFPDQLLSSREGLLKRLYRLPINWLEEHTIGLADKVLVNSKFTLRVFQDTFRRL 180

Query: 709 KDIPDICYPSINTXIF 756
             +PD+ YPS++T  F
Sbjct: 181 STVPDVLYPSLHTQYF 196


>AE014296-567|AAF47719.1|  424|Drosophila melanogaster CG1291-PA
           protein.
          Length = 424

 Score =  242 bits (592), Expect = 4e-64
 Identities = 109/196 (55%), Positives = 138/196 (70%)
 Frame = +1

Query: 169 MVKILFLHPDLGIGGAERLVVDAALAFQKKGHEVAFYTNHHDPTHCFAETRDGTFRVTVV 348
           MV++LFLHPDLGIGGAERLVVDAALA +++GH+V+F TNHHD THCF ET DGTF V VV
Sbjct: 1   MVRVLFLHPDLGIGGAERLVVDAALALKERGHQVSFLTNHHDSTHCFKETADGTFPVHVV 60

Query: 349 GDWIPRSILGRFKXXXXXXXXXXXXXXXXXXXXPNEEPLLIFCDSISLCIPFLKMARGPF 528
           GDW+PR + GRF                       E+  ++ CD IS+CIP L+ A    
Sbjct: 61  GDWLPRGLFGRFYAICAYLRMLYAAIYASFFMPQREQVDVVVCDLISVCIPVLRFAPHRP 120

Query: 529 RVIFYCHHPDKLLTSEGGILKKLYRAPLNWLEELTTAKADKVLVNSKYTARVYQDAFQSI 708
           +V+FYCH PD+LL+S  G+LK+LYR P+NWLEE T   ADKVLVNSK+T RV+QD F+ +
Sbjct: 121 KVLFYCHFPDQLLSSREGLLKRLYRLPINWLEEHTIGLADKVLVNSKFTLRVFQDTFRRL 180

Query: 709 KDIPDICYPSINTXIF 756
             +PD+ YPS++T  F
Sbjct: 181 STVPDVLYPSLHTQYF 196


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,282,577
Number of Sequences: 53049
Number of extensions: 747467
Number of successful extensions: 1612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)