Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e03
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022982-6|AAB69935.1|  264|Caenorhabditis elegans Hypothetical ...   182   2e-46
AF100659-3|AAC68969.2|  334|Caenorhabditis elegans Serpentine re...    29   3.4  
U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z77656-4|CAH04701.1|  536|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF125963-3|AAD14744.2|  356|Caenorhabditis elegans Serpentine re...    28   7.9  

>AF022982-6|AAB69935.1|  264|Caenorhabditis elegans Hypothetical
           protein T23B12.3 protein.
          Length = 264

 Score =  182 bits (443), Expect = 2e-46
 Identities = 82/176 (46%), Positives = 115/176 (65%)
 Frame = +3

Query: 207 LDYPDYFGVHNLFTVKDLFDARVHYGHKIGSLNDNMRSYIYGSRLGHLIFDLDTTAEHLR 386
           L + D F    +  + ++F AR+HYGHK+G++N+NM+  +YG RLG  +FDLD T ++L 
Sbjct: 60  LQHEDLFNFEKMVHIDEMFKARLHYGHKVGTVNNNMKWALYGERLGVCLFDLDITKKYLV 119

Query: 387 KALNFTAHIAYRGGIICFFNRNSLNAHIVEKTAMECGEYAHTRFWRGGIFTNANQQFGAI 566
           +ALNF AH++ RGG+I F   N      VEK A E G+Y+H R W+ G  TN  Q  GA 
Sbjct: 120 RALNFVAHVSLRGGMILFVTSNRDTMFDVEKAADEVGQYSHVRKWQSGTLTNTRQLLGAS 179

Query: 567 TRLPDLCIFLNTQNNILNQHTAVRDSAKMLIPTIGIVDSNCNPNLISYPVPGNDDS 734
            RLPD   FL+T  ++   H A+ ++AKM IPTIG+VDSN +P  ++Y VP NDD+
Sbjct: 180 VRLPDAVCFLSTLTSLGENHPAIVEAAKMAIPTIGVVDSNSDPAYLTYLVPANDDT 235


>AF100659-3|AAC68969.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein23 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 30  THLLISFSYINRTKRNVMILSNTGCRYTKYGFSLLRYTSTSPQVIPENVIDVQQNQ 197
           T LLI  SY+   KRNV  L ++  ++ K+   L    S SP V P+ V  + Q Q
Sbjct: 280 TPLLIQVSYLGCNKRNVNALISS-FKFKKFVQVLCGSDSESPTVHPQ-VYSISQTQ 333


>U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical
           protein F21C10.12 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -2

Query: 201 FSDFVAHQLHSLE*LVEKLMCISEVKIHILYIYTLYYSKSLRF--FLSYLYRKRKSI 37
           F DF+       E ++E    +  + IHI   + +YY  S RF   L YL++KR ++
Sbjct: 261 FKDFLNRHNEYFEVMIEVSNIL--IVIHIGTTFFIYYFFSARFRNILCYLFKKRSNL 315


>AF099922-1|AAK21410.2|  509|Caenorhabditis elegans Hypothetical
           protein F56F11.5 protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = -2

Query: 156 VEKLMCISEVKIHILYIYTLYYSKSLRFFLSYLYRKRKSIDGFVF 22
           +E L C+  +   +  + +L + KSL FF+  L +  K++  FVF
Sbjct: 305 LEILYCVLFITATVSTLRSLEFIKSLGFFVHILKKMMKTVGMFVF 349


>Z83102-4|CAB05467.1|  259|Caenorhabditis elegans Hypothetical
           protein C54C8.5 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 564 ITRLPDLCIFLNTQNNILNQHTAVRDSAKMLIPTI 668
           ITRLPD+    NT  ++ N H  V +    ++P +
Sbjct: 25  ITRLPDMIRLANTLAHVKNLHWIVVEDGYGIVPAV 59


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +3

Query: 30  THLLISFSYINRTKRNVMILSNTGCRYTKYGFSLLRYTSTSPQVIP 167
           T L++  SY++  KRN+ +L ++     +Y F++L +  T   V P
Sbjct: 277 TPLIVQMSYLSCNKRNMSVLFSS--HSIRYFFNVLFHLKTGAVVFP 320


>Z77656-4|CAH04701.1|  536|Caenorhabditis elegans Hypothetical
           protein F07B10.5 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = +1

Query: 367 QQLNIYVKLLISQPTLHTEVESFVFLIGIH*MHISWKKQQWNVENMLIQD 516
           + + +  K+   + T H EVES + L  I   ++ W+   W +++ +  D
Sbjct: 436 ESIQLMRKISNMESTTHNEVESSLNLESIRQENVGWRLYYWMIDHNIKTD 485


>AF125963-3|AAD14744.2|  356|Caenorhabditis elegans Serpentine
           receptor, class h protein10 protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -2

Query: 123 IHILYIYTLYYSKSLRFFLSYLYRKRKSIDGFVFKVFLGYI 1
           I+I+  YTLY  KS  F +   Y     I  F+F+  L  +
Sbjct: 33  IYIMAFYTLYAEKSQNFKIYKRYLATHVISNFLFEFHLSVV 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,887,750
Number of Sequences: 27780
Number of extensions: 415009
Number of successful extensions: 1046
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)