Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16e01
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                37   0.084
BC036053-1|AAH36053.1|  955|Homo sapiens KIAA1505 protein protein.     33   1.4  
AK056542-1|BAB71211.1|  450|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AK097373-1|BAC05026.1|  340|Homo sapiens protein ( Homo sapiens ...    32   1.8  
AY696295-1|AAU10524.1|  292|Homo sapiens cytochrome P450 protein.      31   3.2  
BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 1...    31   5.5  
AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens ...    31   5.5  

>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 36.7 bits (81), Expect = 0.084
 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
 Frame = +3

Query: 387   PPKQASKPNQAV--KKLNITPAKKQEXXXXXXXXXXVTSKPKKQPVKPIKTNPVRPPQXX 560
             PPK    P + V  KK+ + P KK E            + P+K+  + I   P  PP   
Sbjct: 11449 PPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKPESPPPEV 11508

Query: 561   XXXXXXXXXXXXXXXXVPQKSVVTPAKLP 647
                              P+K  VTP K+P
Sbjct: 11509 PEAPKEVVPEKKVPAAPPKKPEVTPVKVP 11537


>BC036053-1|AAH36053.1|  955|Homo sapiens KIAA1505 protein protein.
          Length = 955

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = +1

Query: 238 LIKQIKQKLKVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 417
           ++K+  +K+  P    KKM +  +  +++ K + ++KKL+++ L   + S Q + L   K
Sbjct: 158 IVKEF-EKITKPGEMEKKMKILRESTEELRK-EIMQKKLEIKNLREDLASKQKQLLKEQK 215

Query: 418 QLKNLTLHQLRNKN---HQMTATVMM 486
           +L+ L  HQ+  K+   H  T  V +
Sbjct: 216 ELEELLGHQVVLKDEVAHHQTIPVQI 241


>AK056542-1|BAB71211.1|  450|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31980 fis, clone NT2RP7008487, weakly similar to
           TRICHOHYALIN. ).
          Length = 450

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = +1

Query: 238 LIKQIKQKLKVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 417
           ++K+  +K+  P    KKM +  +  +++ K + ++KKL+++ L   + S Q + L   K
Sbjct: 103 IVKEF-EKITKPGEMEKKMKILRESTEELRK-EIMQKKLEIKNLREDLASKQKQLLKEQK 160

Query: 418 QLKNLTLHQLRNKN---HQMTATVMM 486
           +L+ L  HQ+  K+   H  T  V +
Sbjct: 161 ELEELLGHQVVLKDEVAHHQTIPVQI 186


>AK097373-1|BAC05026.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40054 fis, clone TBAES2000315, weakly similar to
           CYTOCHROME P450 4A1 (EC 1.14.15.3). ).
          Length = 340

 Score = 32.3 bits (70), Expect = 1.8
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +3

Query: 66  DKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQ 245
           D  FK +   +I +  N  +HQ+ EK+ +   ++   K K     K +Q  LDI+     
Sbjct: 234 DLVFKFSSQGQIFSKFNQELHQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDILLSAKS 293

Query: 246 AN 251
            N
Sbjct: 294 EN 295


>AY696295-1|AAU10524.1|  292|Homo sapiens cytochrome P450 protein.
          Length = 292

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 66  DKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDII 230
           D  FK +   +I +  N  +HQ+ EK+ +   ++   K K     K +Q  LDI+
Sbjct: 234 DLVFKFSSQGQIFSKFNQELHQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288


>BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 188
           protein.
          Length = 142

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 389 WLIIGATRI*TFSFFLSCWNFP-ICLNCWFLRGIFFARV 276
           WLI   T+    SFF S WN P   ++C  L G+FFA +
Sbjct: 66  WLIDPETQ--KVSFFTSLWNHPFFTISCITLIGLFFAGI 102


>AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38101 fis, clone D3OST1000270. ).
          Length = 125

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 389 WLIIGATRI*TFSFFLSCWNFP-ICLNCWFLRGIFFARV 276
           WLI   T+    SFF S WN P   ++C  L G+FFA +
Sbjct: 49  WLIDPETQ--KVSFFTSLWNHPFFTISCITLIGLFFAGI 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,828,191
Number of Sequences: 237096
Number of extensions: 1319106
Number of successful extensions: 3249
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3229
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)