Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16d20
(550 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 4.7
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 4.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 4.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 6.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 6.2
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 21 6.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.2
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.7
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -3
Query: 302 RNITPLRPFFVWYP 261
+NI P +++W+P
Sbjct: 137 KNIEPYNNYYIWHP 150
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 4.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 335 HWVGTVILWNRRNI 294
HW+ T W RRN+
Sbjct: 175 HWIWTPHGWMRRNV 188
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 4.7
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = -3
Query: 302 RNITPLRPFFVWYP 261
+NI P +++W+P
Sbjct: 137 KNIEPYNNYYIWHP 150
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 133 PSRPMGPWVPMQEQIPRFRH 152
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 290 PLRPFFVWYP*NITVPAIRH 231
P RP W P +P RH
Sbjct: 136 PSRPMGPWVPMQEQIPRFRH 155
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 21.4 bits (43), Expect = 6.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 402 YFVKLLGSNHTHPQIFP 352
YF L+G+N + + FP
Sbjct: 45 YFPSLIGANEHYSKFFP 61
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 8.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 529 NSVLKSVFKCFSKSLLYC 476
NSV CF SL YC
Sbjct: 163 NSVTGKTTACFEPSLDYC 180
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 68 RYAFVFIMFLA*ITGTHVYSRKAVFV 145
RY F F+++++ T V A+F+
Sbjct: 226 RYGFSFLLYVSGFITTEVAGTYAIFL 251
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,371
Number of Sequences: 438
Number of extensions: 2918
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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