Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16d11
         (442 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122210-1|AAM52722.1|  662|Drosophila melanogaster LP06602p pro...    27   8.6  
AE014297-1455|AAF54753.1|  662|Drosophila melanogaster CG10095-P...    27   8.6  

>AY122210-1|AAM52722.1|  662|Drosophila melanogaster LP06602p
           protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 103 KLL*LKDHGIFHCPNSQHRRRSRSLHGRVFDPNR---GTSARLQRIGNNGGKHCSFS 264
           K + LKD G + C  S   + S  +H R+ +P     G S R  + G+     C  S
Sbjct: 261 KYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIIS 317


>AE014297-1455|AAF54753.1|  662|Drosophila melanogaster CG10095-PA
           protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +1

Query: 103 KLL*LKDHGIFHCPNSQHRRRSRSLHGRVFDPNR---GTSARLQRIGNNGGKHCSFS 264
           K + LKD G + C  S   + S  +H R+ +P     G S R  + G+     C  S
Sbjct: 261 KYVQLKDEGTYECQVSTEPKASAIVHLRIVEPKTELIGESTRHVKAGSQVKLRCIIS 317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,236,910
Number of Sequences: 53049
Number of extensions: 426964
Number of successful extensions: 936
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)