Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16d05
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.2  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   7.2  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 354 NSEGQENWKTVVKGHLTRKK 413
           NSE  E W TVV     RKK
Sbjct: 221 NSENGELWSTVVSKKAQRKK 240


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +1

Query: 538  IFSWNMKPVSEETKSREQRLQ--TRNLKK*LFSLPNTSQYYED 660
            +FS +M+    E   R   +   TRN+ K  FSL N  + Y +
Sbjct: 3111 LFSTSMRENENEFDKRVSMISAPTRNMAKSAFSLRNCYKIYSE 3153


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 211 LIIFAGAAAGYIMQTPSHKRIDIFYSLV 294
           +IIF GAA G ++  P   R +  Y+LV
Sbjct: 12  VIIFIGAAHGLLVVGPKFIRANQEYTLV 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,597
Number of Sequences: 2352
Number of extensions: 18444
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)