Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16d04
(752 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 204 6e-53
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 94 1e-19
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 93 2e-19
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 92 5e-19
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 90 2e-18
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 85 8e-17
10_08_0620 - 19321612-19323237 72 6e-13
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 72 6e-13
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 65 7e-11
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 64 2e-10
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 63 3e-10
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 42 5e-04
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 40 0.002
11_04_0312 - 16259612-16260231,16260264-16262796 30 2.3
07_03_1121 - 24130451-24130462,24130827-24131255 29 3.0
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 29 4.0
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 28 6.9
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 28 9.2
04_04_0193 + 23482177-23484963 28 9.2
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 204 bits (498), Expect = 6e-53
Identities = 100/215 (46%), Positives = 142/215 (66%), Gaps = 3/215 (1%)
Frame = +3
Query: 117 GVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDA 296
G+ MLK+G + SGL+EAV +NI+AC++ + R++ GPNGMNKM+INH+DK FVT+DA
Sbjct: 5 GIQSMLKEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDA 64
Query: 297 GTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIA 476
TI+ EL+V+HPAAK++VLA + Q E+GDG N I +G R+G+ SEI
Sbjct: 65 ATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEII 124
Query: 477 DGYERALDKCLEILPSLI--CNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKAC 650
GY +A++K +EIL L+ +E D +N +EV + +A+ SKQ+G E + LV AC
Sbjct: 125 IGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVLLMRSAVASKQFGQEDILCPLVADAC 184
Query: 651 VAILPEK-TTFNVDNVRVCXILGAGLLQSEVLSGM 752
+ + P+ FNVDNVRV +LG GL S V+ GM
Sbjct: 185 MQVCPKNPANFNVDNVRVAKLLGGGLHNSSVVRGM 219
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 93.9 bits (223), Expect = 1e-19
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Frame = +3
Query: 90 MALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHI 269
MALH P +LKD + SG + + NI A K A +R+ GP M KM+++
Sbjct: 1 MALHAPVL-----VLKDSLKRESGTK-VHHANIQAAKAVADIIRTTLGPQSMLKMLLDAA 54
Query: 270 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 449
VT+D I+RELD+ HPAAK M+ S+ QD EVGDGT VIVL+G
Sbjct: 55 GGIVVTNDGNCILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFID 114
Query: 450 LGVTTSEIADGYERALDKCLEILPSL-ICNEIKDTKNIKEVTKGIVAAIMSKQYG 611
+ I Y +ALD L +L + I ++ D + + K + + Q+G
Sbjct: 115 KNYHPTVICRAYTKALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFG 169
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 93.5 bits (222), Expect = 2e-19
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LK+G G + V NINAC A +VR+ GP GM+K+I + +++D TI+
Sbjct: 11 LLKEGTDTSQGRAQVV-SNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIM 69
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
R LD+ HPAAK++V ++ QD+EVGDGT V++L+ GV + Y
Sbjct: 70 RLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYR 129
Query: 489 RALDKCLEILPSLICN-EIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKACVAI 659
A +E + L + E K + KE+ A +S + G ++F + +V A +AI
Sbjct: 130 TAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVLAI 189
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 91.9 bits (218), Expect = 5e-19
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 2/197 (1%)
Frame = +3
Query: 168 EAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLM 347
+A NI A K A+ +R++ GP GM+KM+ + +T+D TI+ ++DV++ AKLM
Sbjct: 28 DAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLM 87
Query: 348 VLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL 527
V S QD E+GDGT V+V++G G+ IA+GYE A + L +
Sbjct: 88 VELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHI 147
Query: 528 ICNEIKDTKNIKEVTKGIVAAIMSKQYGH-EQFISELVTKACVAILP-EKTTFNVDNVRV 701
NI+ + + + + SK ++ ++E+ KA +A+ E+ N+D ++V
Sbjct: 148 SHKFEFSATNIEPLVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKV 207
Query: 702 CXILGAGLLQSEVLSGM 752
+G L +E++ G+
Sbjct: 208 EGKVGGKLEDTELVYGI 224
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 90.2 bits (214), Expect = 2e-18
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 4/212 (1%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LKD + SG + + NI A K A +R+ GP M KM+++ VT+D I+
Sbjct: 9 VLKDSLKRESGTK-VHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAIL 67
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
RE+D+ HPAAK M+ S+ QD EVGDGT VIVL+G + I Y
Sbjct: 68 REIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYT 127
Query: 489 RALDKCLEILPSLICN-EIKDTKNIKEVTKGIVAAIMSKQYGH--EQFISELVTKACVAI 659
+AL+ L +L + + ++ D + + K + + Q+G + T A V +
Sbjct: 128 KALEDALAVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDATTTAGVDL 187
Query: 660 LPEKTTFNVDN-VRVCXILGAGLLQSEVLSGM 752
++ ++V + G L S VL G+
Sbjct: 188 GQGMREVDIKKYIKVEKVPGGQLEDSRVLKGV 219
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 84.6 bits (200), Expect = 8e-17
Identities = 52/194 (26%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 362
NI A + A +VR++ GP GM+KMI + + +T+D TI+ + + PAA+++ S+
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 363 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL-ICNE 539
QDA GDGT V+VL+G G + AD R + +E+L ++ I E
Sbjct: 91 SQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIE 150
Query: 540 IKDTKN-IKEVTKGIVAAIMSKQYGHEQFISELVTKACVAIL--PEKTTFNVDNVRVCXI 710
+ D + +K + + + ++S+ + +S L A ++++ ++ ++RV
Sbjct: 151 LSDRDSLVKSASTALNSKVVSQ---YSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKK 207
Query: 711 LGAGLLQSEVLSGM 752
LG + +E++ G+
Sbjct: 208 LGGTVDDTELIRGL 221
>10_08_0620 - 19321612-19323237
Length = 541
Score = 71.7 bits (168), Expect = 6e-13
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 8/198 (4%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHID----KQFVTSDAGTIIRELDVEHPAAKLMV 350
NI A + A + R++ GP GM+KMI + +T+D TI+ + + PAA+++
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSL- 527
S+ QDA GDGT V+VL+G G + AD + +E+L +
Sbjct: 91 DLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGMA 150
Query: 528 ICNEIKDTKN-IKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVD--NVR 698
I E+ D +K + + + ++S+ + +S L A +A++ + +D ++R
Sbjct: 151 IPVELSDRDALVKSASTALNSKVVSQ---YSTLLSPLAVDAALAVVDPAHPYLLDLRDIR 207
Query: 699 VCXILGAGLLQSEVLSGM 752
V LG + +E++ G+
Sbjct: 208 VVKKLGCTVDDTELIRGL 225
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 71.7 bits (168), Expect = 6e-13
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 4/207 (1%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMI--INHIDKQFVTSDAG 299
++LKD A G E A A V++ GP GM+K++ VT+D
Sbjct: 3 RVLKDDAVEEKG-ERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 61
Query: 300 TIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIAD 479
TI++ L +++PAAK++V S++QD EVGDGT V+VL+G + + I
Sbjct: 62 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 121
Query: 480 GYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKACV 653
GY A++ L + ++ + I +S + +++ +EL A
Sbjct: 122 GYRMAVECARNALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAEL---AVD 178
Query: 654 AILPEKTTFNVDNVRVCXILGAGLLQS 734
A+L K + N++ +++ I G L S
Sbjct: 179 AVLRLKGSTNLEAIQILKIPGGSLKDS 205
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 64.9 bits (151), Expect = 7e-11
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +3
Query: 120 VPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMI--INHIDKQFVTSD 293
V ++LKD A G E A + + V++ GP GM+K++ VT+D
Sbjct: 2 VDRLLKDDATEEKG-ERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTND 60
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSG 416
TI++ L +++PAAK++V S++QD EVGDGT V+VL+G
Sbjct: 61 GATILKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAG 101
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/78 (37%), Positives = 47/78 (60%)
Frame = +3
Query: 252 MIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXX 431
M+++ I +T+D TI+R L+VEHPAAK++V +++QD EVGDGT V++++
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 432 XXXXXRLGVTTSEIADGY 485
R + + I GY
Sbjct: 61 GNDLVRNKIHPTSIISGY 78
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 62.9 bits (146), Expect = 3e-10
Identities = 36/153 (23%), Positives = 68/153 (44%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 350
A++ NINA K +++ GP G KM++ +T D T+++E+ +++P A ++
Sbjct: 18 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIA 77
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLI 530
+ QD GDGT ++ G G + DG++ A LE L
Sbjct: 78 RTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFK 137
Query: 531 CNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFIS 629
+ + + +E+ K I + + G F++
Sbjct: 138 TSVVMGDEPDREILKMIARTTLRTKVGAVCFLA 170
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +3
Query: 201 QFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPA----AKLMVLASQMQ 368
+ A V GP G N ++ + + +D T+ RE+++E P AKL+ A+
Sbjct: 78 KLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKT 137
Query: 369 DAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEIKD 548
+ GDGT +VL+ G +I G E+ +E L L E++D
Sbjct: 138 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELKKL-SKEVED 196
Query: 549 TK 554
++
Sbjct: 197 SE 198
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPA----A 338
A+ + N + A V GP G N ++ + + +D T+ +E+++E P A
Sbjct: 64 AIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGA 123
Query: 339 KLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
KL+ A+ + GDGT +VL+ G +I G E+ + L
Sbjct: 124 KLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSEL 183
Query: 519 PSLICNEIKDTK 554
+ E++D++
Sbjct: 184 QKM-SKEVEDSE 194
>11_04_0312 - 16259612-16260231,16260264-16262796
Length = 1050
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 87 NMALHVP-KAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMII 260
++ L VP + P ML++ F E V + INA K+ + YGP G+ K ++
Sbjct: 165 DLFLLVPCRRPPNTLMLRNNVMEFGSRNEIVSQIINALKEDKVHIVGVYGPCGIGKSLL 223
>07_03_1121 - 24130451-24130462,24130827-24131255
Length = 146
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -2
Query: 295 ASLVTNCLSI*LMIILFMPLGPYAERTLCANCLQALIFL 179
A+ TNC ++ + + ++ +GP R +CA C+ + F+
Sbjct: 24 AATTTNCCAVCVEPLEWVAIGPCGHRCVCARCIVQVRFV 62
>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 262 LMIILFMPLGPYAERTLCANCLQALIFLYTASSNPEN 152
L+++L L PYA R+ + +Q L+FL A S+PEN
Sbjct: 1095 LLLVLLRSL-PYASRSFQSRAIQDLLFL--ACSHPEN 1128
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 751 IPESTSDCNSPAPRIXHTLTLSTLNVVFSGSIAT 650
+P+S C SP PR+ + T S + VFSG +++
Sbjct: 859 LPKSNGSCLSPIPRVQSSSTHSQTS-VFSGGLSS 891
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 180 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAA 338
RN+ C A + + G G N + +N V S + TII DV HP +
Sbjct: 798 RNVQYCANVALKINAKAG--GRNSVFLNVEASLPVVSKSPTIIFGADVTHPGS 848
>04_04_0193 + 23482177-23484963
Length = 928
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 159 GLEEAVYRNINACKQFAQSVRSAYGPNGMNK-MIINHIDKQFVTSDAGTI 305
GL+ + R NA ++ SV YG G+ K +++H + F+++ A ++
Sbjct: 141 GLDALLARVANAFQEGGTSVIGIYGAPGVGKTTLLHHFNNTFLSASAASM 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,853,750
Number of Sequences: 37544
Number of extensions: 331340
Number of successful extensions: 758
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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