Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16d04
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    25   3.3  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    24   4.4  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    24   4.4  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +3

Query: 528 ICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAILPEKTTFNVDNVRVCX 707
           +C  ++D + +   T+   A +++     E F   ++ K   AI      FN+D  + C 
Sbjct: 264 VCTRLEDLRMVLNQTQDHRAIVLAS-VAKELFSWRIMVKKMKAIYHTLNLFNMDVTKKCL 322

Query: 708 I 710
           I
Sbjct: 323 I 323


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 610 PYCLDMIAATIPFVTSLMF-FVSFISLQMREGRISRHLSSALS 485
           P C   I  T  + T  +F  V   +L+ R GR+ RH  +  S
Sbjct: 176 PACCMYIPFTSFYATCTLFALVQIAALKQRLGRLGRHSGTMAS 218


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +3

Query: 501 KCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYG 611
           +C E    L+ +   +   ++ +  GIV A+ SK +G
Sbjct: 120 RCTETNGQLVLHYYSERPGLEHIVIGIVKAVASKLHG 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,165
Number of Sequences: 2352
Number of extensions: 13803
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)