Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16d04
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 243 1e-64
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 97 1e-20
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 97 1e-20
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 93 2e-19
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 91 1e-18
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 91 1e-18
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 87 2e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 86 3e-17
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 78 8e-15
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 78 8e-15
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 78 8e-15
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 64 1e-10
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 64 1e-10
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 37 0.018
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 33 0.16
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 31 0.88
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 30 1.5
Z30423-3|CAA83005.2| 456|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 28 6.2
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 28 6.2
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 28 8.2
U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifyi... 28 8.2
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 243 bits (594), Expect = 1e-64
Identities = 110/222 (49%), Positives = 162/222 (72%), Gaps = 1/222 (0%)
Frame = +3
Query: 90 MALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHI 269
MA+ +PK+ G + +K+GA+ F G +EAV RNI AC + A +RSAYGPNGMNKM+INHI
Sbjct: 1 MAMKIPKS-GYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHI 59
Query: 270 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 449
+K FVT+DA TI++EL+++HPAA+++++A++MQ+ ++GD TN V++L+
Sbjct: 60 EKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIH 119
Query: 450 LGVTTSEIADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQFIS 629
+G+T E+A GYE+A +K LEILP+L+ E D KNI+EV + I +AI SKQY +E I+
Sbjct: 120 MGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIA 179
Query: 630 ELVTKACVAILPEKT-TFNVDNVRVCXILGAGLLQSEVLSGM 752
+LV KACV P + FNVDN+R+C I+G+G+ S V++GM
Sbjct: 180 DLVAKACVTTCPANSFNFNVDNIRICKIIGSGVHTSTVMNGM 221
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 97.1 bits (231), Expect = 1e-20
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Frame = +3
Query: 180 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 359
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 360 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNE 539
Q+QD EVGDGT V++++ + V + I +GY A + ++ + I +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI-SF 142
Query: 540 IKDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTKACVAILPE---KTTFNVDNVRVCX 707
D+ + V ++ SK G + F ELV A A+ E K T+ ++ V V
Sbjct: 143 TSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLK 202
Query: 708 ILGAGLLQSEVLSG 749
G +S ++ G
Sbjct: 203 AHGKSARESVLVKG 216
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 97.1 bits (231), Expect = 1e-20
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Frame = +3
Query: 180 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 359
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 360 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNE 539
Q+QD EVGDGT V++++ + V + I +GY A + ++ + I +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENI-SF 142
Query: 540 IKDTKNIKEVTKGIVAAIMSKQYGHE-QFISELVTKACVAILPE---KTTFNVDNVRVCX 707
D+ + V ++ SK G + F ELV A A+ E K T+ ++ V V
Sbjct: 143 TSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENNGKVTYPINAVNVLK 202
Query: 708 ILGAGLLQSEVLSG 749
G +S ++ G
Sbjct: 203 AHGKSARESVLVKG 216
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPSL 527
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPSL 527
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/138 (35%), Positives = 81/138 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPSL 527
ADG++ A K LE L S+
Sbjct: 135 ADGFDLACKKALETLDSI 152
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 90.6 bits (215), Expect = 1e-18
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 489 RALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQ-FISELVTKACVAILP 665
+A +K L+ L L +T+ + + K + SK E+ F + ++ A V L
Sbjct: 127 KACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA-VNTLD 185
Query: 666 EKTTFNVDNVRVCXILGAGLLQSEVLSGM 752
N+ ++ + G L +S ++ G+
Sbjct: 186 AHLPLNMIGIK--KVNGGNLHESRLIKGV 212
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 90.6 bits (215), Expect = 1e-18
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 489 RALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQYGHEQ-FISELVTKACVAILP 665
+A +K L+ L L +T+ + + K + SK E+ F + ++ A V L
Sbjct: 127 KACEKTLKNLADLEIKINGETELREMLVKCAATTLSSKLVSQERLFFANMIVDA-VNTLD 185
Query: 666 EKTTFNVDNVRVCXILGAGLLQSEVLSGM 752
N+ ++ + G L +S ++ G+
Sbjct: 186 AHLPLNMIGIK--KVNGGNLHESRLIKGV 212
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 86.6 bits (205), Expect = 2e-17
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 362
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 363 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 542
QD E GDGT V+V++G G+ + I++ ++ A + +IL + +
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEM--SSP 153
Query: 543 KDTKNIKEVTKGIVAAIMSKQYG-HEQFISELVTKACVAILPEKTTFNVD--NVRVCXIL 713
D N + K ++ SK H ++ + A I+ + NV+ +++ +
Sbjct: 154 VDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKM 213
Query: 714 GAGLLQSEVLSG 749
G + +SE++ G
Sbjct: 214 GDTVEESELIEG 225
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 86.6 bits (205), Expect = 2e-17
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 3/192 (1%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 362
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 363 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEILPSLICNEI 542
QD E GDGT V+V++G G+ + I++ ++ A + +IL + +
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEM--SSP 153
Query: 543 KDTKNIKEVTKGIVAAIMSKQYG-HEQFISELVTKACVAILPEKTTFNVD--NVRVCXIL 713
D N + K ++ SK H ++ + A I+ + NV+ +++ +
Sbjct: 154 VDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKIINSENDSNVNLKMIKIIKKM 213
Query: 714 GAGLLQSEVLSG 749
G + +SE++ G
Sbjct: 214 GDTVEESELIEG 225
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 85.8 bits (203), Expect = 3e-17
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 6/214 (2%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+L G + SG + + NINACK A +R++ GP M KM+++ + +T+D I+
Sbjct: 11 VLSQGTKRESGHQVQI-GNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAIL 69
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
RE+ V+HPAAK M+ ++ QD E GDGT VI+L+G + I Y
Sbjct: 70 REITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYR 129
Query: 489 RALDKCLEILPSLICN--EIKDTKNIKEVTKGIVAAIMSKQYGHEQFISELVTKACVAIL 662
+AL+ ++ + +I D I +V K + M ++ + +A I
Sbjct: 130 QALEDMIQWSENKFSKTVDITDDAEIAKVVKSCLGTKMISKW--MDLAVNISIQAVKTIR 187
Query: 663 PEKT-TFNVDNVRVC---XILGAGLLQSEVLSGM 752
EK +D R C I G + S+V+ G+
Sbjct: 188 VEKAGVREIDIKRYCRIEKIPGGRIEDSQVVKGI 221
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 77.8 bits (183), Expect = 8e-15
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 647
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 648 CVAILPEKTTFNVDNVRVCXILGAGLLQSEVLSG 749
A+L K + N+D +++ LG + +S + G
Sbjct: 178 VDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEG 211
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 77.8 bits (183), Expect = 8e-15
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 647
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 648 CVAILPEKTTFNVDNVRVCXILGAGLLQSEVLSG 749
A+L K + N+D +++ LG + +S + G
Sbjct: 178 VDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEG 211
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 77.8 bits (183), Expect = 8e-15
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEILPSLICNEIKDTKNIKEVTKGIVAAIMSKQY--GHEQFISELVTKA 647
GY RAL E SL + I+ NI++ I + + H++ ++L A
Sbjct: 124 ISGYRRALGIAQE---SLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQL---A 177
Query: 648 CVAILPEKTTFNVDNVRVCXILGAGLLQSEVLSG 749
A+L K + N+D +++ LG + +S + G
Sbjct: 178 VDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEG 211
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 350
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 350
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 36.7 bits (81), Expect = 0.018
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 207 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 374
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 375 EVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALD 500
E GDGT VL+ R G EI G A++
Sbjct: 99 EAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVE 140
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 207 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 374
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 375 EVGDGTNFVIVLS 413
E GDGT VL+
Sbjct: 99 EAGDGTTCATVLT 111
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 615 EQFISELVTKACVAILPEKTTFNVDNVRV 701
E + EL+ +AC +PE+T F +D V V
Sbjct: 909 ESLVEELIEEACYGEIPEETLFALDEVEV 937
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 272 INMIDDHFVHAIRAICRTHTLCKL 201
IN ID H H RA+C +H L ++
Sbjct: 483 INHIDMHMAHVSRAVCHSHVLSQI 506
>Z30423-3|CAA83005.2| 456|Caenorhabditis elegans Hypothetical
protein T20G5.4 protein.
Length = 456
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = -2
Query: 721 PAPRIXHTLTLSTLNVVFSGSIATQAFVTSSEMNCS*PYCLDMIAATIPFVTSLMFFVSF 542
P P I T+ +++ F I + +V SE++ P DMI PF+TS+ F
Sbjct: 231 PLPIIYPTIVCLAVHMYFFVGILARQYVKGSEID---P---DMIDLVFPFMTSIQFVFYM 284
Query: 541 ISLQMREGRIS 509
L++ EG ++
Sbjct: 285 GWLKVGEGLLN 295
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 39 ITRLKE*IEIKEF*STNMALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSV 218
IT L + +++ ++ + L PK QMLK+ ++ S + +N CK + V
Sbjct: 415 ITYLNQ-LKMADYYEVSENLTAPKISSCSQMLKNNVKLLSAFFAYITNKLNECKLLSHEV 473
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -1
Query: 332 WMFHI*LSYDGASITGNKLLINMIDDHFVHAIRAICRTHTLCKL 201
W FH+ Y GAS + +LI+++ F + IC+ LCKL
Sbjct: 83 WGFHLMCLY-GASYS---VLISLLATQFFYRYLVICKPEHLCKL 122
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical
protein F36H2.3 protein.
Length = 1388
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 745 ESTSDCNSPAPRIXHTLTLSTLNVVFSGSIATQA 644
++T +C + RI T+T S+ SG+IAT A
Sbjct: 489 QTTGNCEAIPTRINGTITYSSFGTYTSGTIATLA 522
>U58730-1|AAC48058.1| 514|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 2 protein.
Length = 514
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 480 GYERALDKCLEILPSLICNEIKDTKNIKEV 569
GY++ LD+ I P IC+EI + + E+
Sbjct: 291 GYDQGLDRVFVIWPITICHEIDERSPLWEI 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,766,922
Number of Sequences: 27780
Number of extensions: 308314
Number of successful extensions: 848
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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