Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16d02
(222 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 1.6
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 1.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 2.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 2.8
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 20 2.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 20 3.6
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 19 4.8
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 19 4.8
AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory recept... 19 6.4
AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory recept... 19 6.4
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 19 6.4
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 19 8.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 19 8.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 19 8.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 19 8.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 19 8.4
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 19 8.4
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 19 8.4
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 1.6
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -3
Query: 133 LIKTLCVCVFYLSHKMDVWQKSQPILVFFS 44
+++T+C+C+F K++ + +QP+LV S
Sbjct: 330 IVRTVCLCLF--GGKVND-ESTQPMLVLNS 356
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 1.6
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = -3
Query: 133 LIKTLCVCVFYLSHKMDVWQKSQPILVFFS 44
+++T+C+C+F K++ + +QP+LV S
Sbjct: 330 IVRTVCLCLF--GGKVND-ESTQPMLVLNS 356
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 2.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 74 KITTNISVFFLHYEIQL 24
KI NIS+ ++ Y+I L
Sbjct: 873 KINENISMLYIGYQIIL 889
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 2.8
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 74 KITTNISVFFLHYEIQL 24
KI NIS+ ++ Y+I L
Sbjct: 873 KINENISMLYIGYQIIL 889
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 20.2 bits (40), Expect = 2.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 70 IFARRPFYVINKTHTHTK 123
IF PFY N+ H+K
Sbjct: 417 IFLITPFYNFNENTIHSK 434
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 19.8 bits (39), Expect = 3.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 90 LCDK*NTHTH 119
LCDK THT+
Sbjct: 997 LCDKTETHTN 1006
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 19.4 bits (38), Expect = 4.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1
Query: 108 CFIYHIKWTSGKNHNQY*CFFLTLRDS 28
CF KW N+ QY L RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 19.4 bits (38), Expect = 4.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1
Query: 108 CFIYHIKWTSGKNHNQY*CFFLTLRDS 28
CF KW N+ QY L RDS
Sbjct: 100 CFCDPAKWIRLNNNLQYIDEVLKNRDS 126
>AM292383-1|CAL23195.2| 320|Tribolium castaneum gustatory receptor
candidate 62 protein.
Length = 320
Score = 19.0 bits (37), Expect = 6.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 64 VVIFARRPFYVINKT 108
V +FA FY IN++
Sbjct: 291 VPVFAAARFYAINRS 305
>AM292358-1|CAL23170.2| 331|Tribolium castaneum gustatory receptor
candidate 37 protein.
Length = 331
Score = 19.0 bits (37), Expect = 6.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 64 VVIFARRPFYVINKT 108
V +FA FY IN++
Sbjct: 291 VPVFAAARFYAINRS 305
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 19.0 bits (37), Expect = 6.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 64 VVIFARRPFYVINKT 108
V +FA FY IN++
Sbjct: 611 VPVFAAARFYAINRS 625
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 18.6 bits (36), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 74 KITTNISVFFLHYEIQL 24
KI NIS+ ++ Y+I L
Sbjct: 640 KINENISMPYIGYQIIL 656
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 83 RLAKITTNISVFFLHYEIQL 24
R +I NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 18.6 bits (36), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 83 RLAKITTNISVFFLHYEIQL 24
R +I NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 18.6 bits (36), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 83 RLAKITTNISVFFLHYEIQL 24
R +I NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 18.6 bits (36), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -2
Query: 83 RLAKITTNISVFFLHYEIQL 24
R +I NIS+ ++ Y+I L
Sbjct: 897 RTIEINDNISMPYIGYQILL 916
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 18.6 bits (36), Expect = 8.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 128 KNFVCVCVLFI 96
KNFVC+ L I
Sbjct: 262 KNFVCLLSLII 272
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory
receptor candidate 15 protein.
Length = 455
Score = 18.6 bits (36), Expect = 8.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 82 VWQKSQPILVFFSY 41
++QK P+L+F Y
Sbjct: 30 LYQKLYPVLMFLIY 43
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,764
Number of Sequences: 336
Number of extensions: 470
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used: 3009020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
- SilkBase 1999-2023 -