Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16c24
(318 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 23 2.8
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 23 2.8
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 23 2.8
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 23 2.8
AJ297933-1|CAC35453.2| 392|Anopheles gambiae Ag9 protein protein. 23 3.6
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 22 6.4
AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein. 22 6.4
AY330176-1|AAQ16282.1| 179|Anopheles gambiae odorant-binding pr... 22 6.4
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 21 8.4
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 21 8.4
AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein. 21 8.4
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 21 8.4
AJ618926-1|CAF02005.1| 315|Anopheles gambiae odorant-binding pr... 21 8.4
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 151 VIRGLGAPLSSRPVVEISAAKHCVDNRWVY 240
V+ A LS +VE + +C+DN +Y
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 151 VIRGLGAPLSSRPVVEISAAKHCVDNRWVY 240
V+ A LS +VE + +C+DN +Y
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 151 VIRGLGAPLSSRPVVEISAAKHCVDNRWVY 240
V+ A LS +VE + +C+DN +Y
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 151 VIRGLGAPLSSRPVVEISAAKHCVDNRWVY 240
V+ A LS +VE + +C+DN +Y
Sbjct: 75 VVEPYNATLSIHQLVENTDETYCIDNEALY 104
>AJ297933-1|CAC35453.2| 392|Anopheles gambiae Ag9 protein protein.
Length = 392
Score = 22.6 bits (46), Expect = 3.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 261 NSTIRLSVHPTVVDAVFC 208
N TIRL VH T V A C
Sbjct: 61 NRTIRLQVHFTWVLAALC 78
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 139 ETFEVIRGLGAPLSSRPVV 195
ETF V+RG+ A +S+ V
Sbjct: 116 ETFCVLRGIAAEMSANATV 134
>AY578807-1|AAT07312.1| 438|Anopheles gambiae punt protein.
Length = 438
Score = 21.8 bits (44), Expect = 6.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +3
Query: 3 FCCCRSSVDARDER 44
+CCCR S+ R+ +
Sbjct: 33 YCCCRGSMCNREHK 46
>AY330176-1|AAQ16282.1| 179|Anopheles gambiae odorant-binding
protein AgamOBP49 protein.
Length = 179
Score = 21.8 bits (44), Expect = 6.4
Identities = 6/18 (33%), Positives = 11/18 (61%)
Frame = +1
Query: 211 KHCVDNRWVYGKSNSRIK 264
KHC D+RW + +++
Sbjct: 155 KHCPDDRWTASEICGKVR 172
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 196 EISAAKHCVDNRWVYGKSNSRIKN 267
+ SAA + NRWV + +I+N
Sbjct: 236 QASAASTALINRWVSDVTAGKIRN 259
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 21.4 bits (43), Expect = 8.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 133 PCETFEVIRGLGAPLSSRPVVEISAAKH--CVDNR 231
P E + I LGA S V+E+S H C NR
Sbjct: 379 PAEIPKHISALGAKQSKMEVMELSDLHHPNCKMNR 413
>AY578797-1|AAT07302.1| 304|Anopheles gambiae activin protein.
Length = 304
Score = 21.4 bits (43), Expect = 8.4
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -2
Query: 161 PRITSKVSHGRINLPKTTFRRSN*GSGLKVILNMPHISSSFVTRIDRR 18
PR K H PK+ R+ G G N PH+ S T RR
Sbjct: 122 PRSVVKAKH-----PKSQERKVAYGEGTDDDYNRPHLFVSLATTQVRR 164
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 174 AQLASGGGDIGGKTLR 221
A LA G G +GG++ R
Sbjct: 290 AALAGGSGTVGGRSKR 305
>AJ618926-1|CAF02005.1| 315|Anopheles gambiae odorant-binding
protein OBPjj6b protein.
Length = 315
Score = 21.4 bits (43), Expect = 8.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 211 KHCVDNRW 234
KHC D+RW
Sbjct: 155 KHCPDDRW 162
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,737
Number of Sequences: 2352
Number of extensions: 4685
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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