Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16c24
(318 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 33 0.059
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 33 0.059
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 33 0.059
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.24
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 31 0.24
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 31 0.24
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 29 0.55
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 29 0.55
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 29 0.55
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 29 0.55
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 29 0.55
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 29 0.55
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 29 0.55
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 29 0.55
U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin iso... 29 0.96
U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin pro... 29 0.96
U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin pro... 29 0.96
U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 27 2.2
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 27 2.2
U28991-12|AAA68386.2| 550|Caenorhabditis elegans Hypothetical p... 27 2.9
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 27 3.9
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 26 6.8
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 26 6.8
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 26 6.8
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 25 8.9
U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical pr... 25 8.9
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 25 8.9
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.059
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 19 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 198
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 199 ISAAKHC 219
+ HC
Sbjct: 168 VEIT-HC 173
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 32.7 bits (71), Expect = 0.059
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 19 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 198
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 199 ISAAKHC 219
+ HC
Sbjct: 168 VEIT-HC 173
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 32.7 bits (71), Expect = 0.059
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 19 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVVE 198
LLSM D F IT + +P D ++ VFG +I E + I L +PV +
Sbjct: 108 LLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCK 167
Query: 199 ISAAKHC 219
+ HC
Sbjct: 168 VEIT-HC 173
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 165
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 165
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 165
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGL 165
G+LSM + F ITF+P D ++ +FGRL+ +T I L
Sbjct: 364 GVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKL 413
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 217 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 251
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 217 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 251
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 91 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 125
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 29.5 bits (63), Expect = 0.55
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 200 ISTTGRELSGAPKPRITSKVSHGRINLPKTTFRRS 96
IST + S AP PR SK+S R ++ K+T RS
Sbjct: 239 ISTPRQTASTAPSPRPISKMSRERSDVQKSTSTRS 273
>U34954-1|AAC47114.1| 147|Caenorhabditis elegans cyclophilin
isoform 10 protein.
Length = 147
Score = 28.7 bits (61), Expect = 0.96
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 196 E 198
+
Sbjct: 145 Q 145
>U23453-6|AAC46758.1| 147|Caenorhabditis elegans Cyclophylin
protein 10, isoform a protein.
Length = 147
Score = 28.7 bits (61), Expect = 0.96
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 196 E 198
+
Sbjct: 145 Q 145
>U23453-5|AAK68671.1| 161|Caenorhabditis elegans Cyclophylin
protein 10, isoform b protein.
Length = 161
Score = 28.7 bits (61), Expect = 0.96
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G +SM D F IT+ D++ +FG++I +T E I + RP+V
Sbjct: 85 GCVSMANNGPDSNRSQFFITYAKQAHLDMKYTLFGKVIDGFDTLEEIETIKVDNKYRPLV 144
Query: 196 E 198
+
Sbjct: 145 Q 145
>U00064-1|AAD31935.1| 845|Caenorhabditis elegans Hypothetical
protein ZC155.3 protein.
Length = 845
Score = 27.9 bits (59), Expect = 1.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 19 LLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEV---IRGLGAPLSSRP 189
L+S R +D G+ N F P P FDL + + + F + I G APL SR
Sbjct: 127 LISHRFHEDQ---GLTNSVFVPCPSFDLDGIPICQTESEKDRFNLEMKIIGKYAPLGSRT 183
Query: 190 VVEIS 204
+ E++
Sbjct: 184 LAELA 188
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 278 IVHQFLILLLDFPYTQRLSTQCFAADISTTGRELSGAPKP--RITSKVS 138
++++ L ++DF + Q ++ I+ G++L AP+P +T+ VS
Sbjct: 109 VIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPPMAVTNAVS 157
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 278 IVHQFLILLLDFPYTQRLSTQCFAADISTTGRELSGAPKP--RITSKVS 138
++++ L ++DF + Q ++ I+ G++L AP+P +T+ VS
Sbjct: 109 VIYELLDEMMDFGFPQTTESRILQEYITQEGQKLISAPRPPMAVTNAVS 157
>U28991-12|AAA68386.2| 550|Caenorhabditis elegans Hypothetical
protein F08F8.2 protein.
Length = 550
Score = 27.1 bits (57), Expect = 2.9
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -1
Query: 273 TSVFNSTI-RLSV--HPTVVDAVFCRRYLHHRTRAERGA*AANHFKSLAR 133
TS+FNS + R V PT DAV +R+L H +R A F+S +R
Sbjct: 212 TSIFNSGMTRAPVVKFPTARDAVSMKRWLEHPENQDR---ARQEFQSCSR 258
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G+LSM + F IT P D ++ +FGR+ + + + RP +
Sbjct: 94 GILSMANAGPNTNGSQFFITLAPTQHLDGKHTIFGRVAAGMKVIANMGRVDTDNHDRPKI 153
Query: 196 EISAAK 213
EI K
Sbjct: 154 EIRILK 159
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 64 FNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLG 168
F +TF+ P + +V FG L+ + + I LG
Sbjct: 115 FYVTFRETPWMNRFHVAFGELVEGFDVLDAIENLG 149
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G LSM +D F IT D ++VVFG+++ + I RP+
Sbjct: 118 GWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIE 177
Query: 196 EISAA 210
++ A
Sbjct: 178 DVVIA 182
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIRGLGAPLSSRPVV 195
G LSM +D F IT D ++VVFG+++ + I RP+
Sbjct: 118 GWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIE 177
Query: 196 EISAA 210
++ A
Sbjct: 178 DVVIA 182
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIR 159
G LSM D F IT P D R+VVFG+++ E +V+R
Sbjct: 121 GWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKIL---EGMDVVR 165
>U40943-1|AAK72061.2| 398|Caenorhabditis elegans Hypothetical
protein F47F2.1b protein.
Length = 398
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -3
Query: 76 RLY*ICRTFRRL--SSRASTEDLQQQ 5
RL+ ICR FRRL SS +S E ++ +
Sbjct: 16 RLFRICRFFRRLMSSSTSSVESVEDE 41
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +1
Query: 16 GLLSMRVTKDDEMCGIFNITFKPLPQFDLRNVVFGRLILPCETFEVIR 159
G LSM D F IT P D R+VVFG+++ E +V+R
Sbjct: 121 GWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKIL---EGMDVVR 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,655,828
Number of Sequences: 27780
Number of extensions: 115716
Number of successful extensions: 336
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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