Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16c18
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0085 - 17995800-17995985,17996724-17996823,17996919-179971... 167 6e-42
03_02_0154 + 5967512-5967658,5968206-5968652,5968766-5968846,596... 163 2e-40
07_03_0755 - 21261855-21261945,21262277-21262323,21262819-212630... 31 0.74
12_02_0315 - 17417161-17417401,17419426-17419616 30 1.7
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 30 1.7
11_06_0066 - 19741883-19742263,19743001-19743231,19743378-197435... 29 3.0
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 29 3.0
12_02_0137 + 14153603-14153629,14154136-14154586,14155066-141552... 29 3.9
07_03_1396 - 26259614-26259739,26259853-26259939,26260032-262604... 29 3.9
04_04_1688 + 35372355-35373101 29 3.9
09_04_0469 + 17864265-17864789,17865648-17865854,17865936-178661... 28 6.9
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 28 6.9
04_04_0188 - 23433753-23436572 28 6.9
01_02_0129 + 11410345-11410487,11410908-11411014,11414512-114147... 28 6.9
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 28 9.1
04_04_1621 + 34842062-34842066,34842270-34842921 28 9.1
04_03_0199 - 12559351-12559433,12559693-12559827,12560260-125604... 28 9.1
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 28 9.1
>01_05_0085 -
17995800-17995985,17996724-17996823,17996919-17997115,
17997836-17997916,17998046-17998492,17998774-17998920
Length = 385
Score = 167 bits (407), Expect = 6e-42
Identities = 92/234 (39%), Positives = 141/234 (60%), Gaps = 6/234 (2%)
Frame = +1
Query: 55 FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 234
++ ++ + P LA +A L +LY +KLWHQLTLKL F++ PA Q GD +IQLYNNF++
Sbjct: 5 YVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNFISD 64
Query: 235 FESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKV-----ETKVKMNDEALALCKVLQGQI 399
FE+KIN L L QY +K A++FLE V ET+ + DE + K+ I
Sbjct: 65 FETKINLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQIAAI 124
Query: 400 YIEQLNDYDAAEKIIEHLESTLEDADGVTP-VHGRFYKLASEYYRVRGPTGRYYRAALRY 576
+E+ D +K+++ +STL+ V P VH FY ++S+Y++ +Y+ AL Y
Sbjct: 125 NLEK-GDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWISSQYHKACQEFAEFYKNALLY 183
Query: 577 VGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAHPILHSLRGTPNEW 738
+ E+L + + D+AF L+L+ +L ++Y+ GELLAHPI++SL GT EW
Sbjct: 184 LAYTT-VESLSESFKLDLAFDLSLAALLGDNIYNFGELLAHPIINSLIGTKVEW 236
>03_02_0154 +
5967512-5967658,5968206-5968652,5968766-5968846,
5969058-5969075,5969552-5969748,5969844-5969943,
5970676-5970861
Length = 391
Score = 163 bits (395), Expect = 2e-40
Identities = 94/240 (39%), Positives = 142/240 (59%), Gaps = 12/240 (5%)
Frame = +1
Query: 55 FLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTT 234
F+ ++ + P LA +A L +LY +KLWHQLTLKL F++ PA Q GD LIQLYNNF+T
Sbjct: 5 FVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNFITD 64
Query: 235 FESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMN-----DEALALCKVLQGQI 399
FE+KIN L L QY +K A++FLE V TK++ +E + K+ I
Sbjct: 65 FETKINLLKLAHFAVIASRQYPDKDAAISFLEGVITKLRETKDLRINEPILYVKMQIAAI 124
Query: 400 YIEQLNDYDAAEKIIEHLESTLEDADGVTP-VHGRFYKLASEYYRVRGPTGRYYRAALRY 576
+E+ N + +K+++ +STL+ V P VH Y ++S+Y++ R +Y+ AL Y
Sbjct: 125 NLEKGNQKE-CKKLLDEGKSTLDSMTDVDPTVHASLYWISSQYHKARQEFAEFYKNALLY 183
Query: 577 VGCADGGEALPATERADIAFRLALSGVLAPDVYDLGELLAHPI------LHSLRGTPNEW 738
+ E+L + + D+AF L+L+ +L ++Y+ GELLAHPI ++SL GT EW
Sbjct: 184 LAYTT-VESLSESFKLDLAFDLSLAALLGDNIYNFGELLAHPINCKASKINSLIGTKVEW 242
>07_03_0755 -
21261855-21261945,21262277-21262323,21262819-21263014,
21263239-21263340,21263602-21263678,21264037-21264236,
21264324-21264681,21265245-21265301,21265434-21266192,
21266287-21266468,21266651-21266813
Length = 743
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +1
Query: 100 WAKLEELYNKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIA 279
+ ++ + K+ W LK + V L+R +++L + T SKI+PL+L + ++
Sbjct: 377 YERIAIMEKKQAWSNKELKYLQGVNERLLKR---VVELKGT-VKTLNSKIDPLTLDDSLS 432
Query: 280 HIVEQYVNKRDAV 318
VEQ + D +
Sbjct: 433 QFVEQCLGSEDVI 445
>12_02_0315 - 17417161-17417401,17419426-17419616
Length = 143
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 743 QAHSLGVPLRECRIG*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPS 588
QA G P ++ R G N K YT ++ P + A A + A + PPS
Sbjct: 74 QAWEFGKPSQKRRFGSQGNEEK-YTRASTEPPAVAAAAAKAAAAAAKRPPPS 124
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +1
Query: 283 IVEQYVNKRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLEST 462
+ E V VT E V+ + ++D+ + K +Q + E + AAE+ +EH +T
Sbjct: 1338 VQEPMVEDEKTVTTEETVQDPMVVDDKTMTTEKTVQDSMVEEGGTNIAAAEETVEHAAAT 1397
Query: 463 LEDADG 480
E G
Sbjct: 1398 AEALAG 1403
>11_06_0066 -
19741883-19742263,19743001-19743231,19743378-19743530,
19743667-19743726,19743806-19743874,19744639-19744719,
19744818-19744920,19745392-19745534,19745621-19745683,
19745803-19745870,19745974-19746055,19746147-19746260,
19746362-19746570,19746647-19746818
Length = 642
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/104 (24%), Positives = 49/104 (47%)
Frame = +1
Query: 4 NSENMATVKFAVIDVSDFLTKKQASEPALAADWAKLEELYNKKLWHQLTLKLQEFVKNPA 183
++++ + AV DV D T ++ S+ + +E +YN+++ LTL ++ + +
Sbjct: 107 SADHPGIIPLAVRDVFD--TAREVSDREFLIRVSYME-IYNEEINDLLTLGSEKLPIHES 163
Query: 184 LQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDA 315
L+RG + L + + E L L E H E +N R +
Sbjct: 164 LERGVYVSGLREEIVNSAEQVFKLLELGEANRHFGETNMNVRSS 207
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -1
Query: 695 ANNSPKSYTSGASTPERASLKAIS----ARSVAGRASPPSAHPTYRS 567
A +SP S +S +STP R ++ A S R GRA P P+ RS
Sbjct: 112 APSSPSSSSSSSSTPVRDAVAAESQSAPRRLAGGRAPPDGLWPSMRS 158
>12_02_0137 +
14153603-14153629,14154136-14154586,14155066-14155260,
14155366-14155628,14155964-14156104,14156188-14156283,
14156672-14156749,14157134-14157194,14157324-14157511,
14158441-14158569
Length = 542
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -1
Query: 716 RECRIG*ANNSPKSYTSGASTPE--RASLKAISARSVA-GRASPP 591
R C +G NN P S + ST E A K+ ARS A ASPP
Sbjct: 96 RVCLVGVGNNMPSSAAACRSTGETIAAVAKSAQARSAAVALASPP 140
>07_03_1396 -
26259614-26259739,26259853-26259939,26260032-26260409,
26260497-26260692,26260794-26261032,26261132-26261272
Length = 388
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 148 TLKLQEFVKNPALQR-GDNLIQLYNNFLTTFESKINPLSLVEIIAHI 285
T+ L EF + A Q GDN +Q N +SK+ PLS ++ I++I
Sbjct: 169 TVHLSEFPNDFAAQSVGDNAVQTVGN-----QSKVTPLSWIDCISNI 210
>04_04_1688 + 35372355-35373101
Length = 248
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 421 YDAAEKIIEHLESTLEDADGVTPVHGRFYKLASEYYRVRGPTGRYYRAALRYVGCADGGE 600
Y+A ++ + TL A G GRF A+ R P G+ +RAAL G ++GG
Sbjct: 112 YEAEPLLLFFILFTLLGAIGALGDRGRFVDDATGLERAVIPPGKGFRAAL---GLSEGGP 168
Query: 601 ALPATERADI-AFRLALSGV 657
T+ ++ RLA G+
Sbjct: 169 LFGFTKANELFVGRLAQLGI 188
>09_04_0469 +
17864265-17864789,17865648-17865854,17865936-17866175,
17866705-17866771,17866872-17867015,17867202-17867297,
17867818-17867975,17868054-17868190,17868551-17868752
Length = 591
Score = 28.3 bits (60), Expect = 6.9
Identities = 29/119 (24%), Positives = 46/119 (38%)
Frame = +1
Query: 124 NKKLWHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVN 303
N K W Q+ +L F+K +G ++ Y+N +F S + P IA + V
Sbjct: 178 NFKEWKQVLQELGRFLKADGAYKGSRSLR-YDNLFDSFPSNLAP------IARFHSKRVL 230
Query: 304 KRDAVTFLEKVETKVKMNDEALALCKVLQGQIYIEQLNDYDAAEKIIEHLESTLEDADG 480
K +VK + L ++LQ + E Y A K + T+ D G
Sbjct: 231 KLKEAVLTSYHRNEVKFTELTLDTFRMLQ-CLEWEPTGSYQIAAKELTE-NGTISDQSG 287
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 629 ISARSVAGRASPPSAHPTYRSAAR 558
++A SV+GR PS+ +YR+AAR
Sbjct: 19 LAAASVSGRGRSPSSASSYRAAAR 42
>04_04_0188 - 23433753-23436572
Length = 939
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 647 RASLKAISARSVAGRASPPSAH 582
R +L+ ++ARS GRA PP+ H
Sbjct: 36 REALRQLAARSARGRAPPPTDH 57
>01_02_0129 +
11410345-11410487,11410908-11411014,11414512-11414786,
11415014-11415179,11415681-11415922,11417046-11417141,
11417574-11417761,11418573-11418789
Length = 477
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -2
Query: 592 RRRTQRTEALRGSNGQWDHGLCNIPRLTYKIVRELESHHQHLRVYFLNVQ 443
+R+T+RT RG + +C+I T + ++ + L Y LN++
Sbjct: 328 KRKTERTVGGRGGEAEVKDIMCHIYTTTKESLKSISPPEMKLLKYLLNIE 377
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 136 WHQLTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDA 315
W+++TL+ F KN + LY T F+S ++ +L+ AHI + R A
Sbjct: 474 WNKVTLRRDSFDKNEM----EFYEALYTQSRTQFDSYVDAGTLMNNYAHIFDLLTRLRQA 529
Query: 316 V 318
V
Sbjct: 530 V 530
>04_04_1621 + 34842062-34842066,34842270-34842921
Length = 218
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -1
Query: 746 SQAHSLGVPLRECRIG*ANNSPKSYTSGASTPERASLKAISARSVAGRASPPSAHPTYRS 567
S A +LG P R CR A + GA+ +R A S AG+ + P +R+
Sbjct: 4 SAAENLGNPQRPCRSRAAMRDGERAEVGAAGVKRKEASASSDSEPAGKKAKKKILPKWRA 63
Query: 566 AA 561
A
Sbjct: 64 NA 65
>04_03_0199 -
12559351-12559433,12559693-12559827,12560260-12560437,
12560848-12561389,12561398-12564827
Length = 1455
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +1
Query: 409 QLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLASEYYRVRGP----TGRYYRAALRY 576
Q++D + A + L+ E+ +G+ P H Y S Y + P T Y LR
Sbjct: 707 QMSDSNGAPSLDHILDIASEELEGLEPHHNLKYLRISWYNGTKAPTWLSTSLTYLQTLRL 766
Query: 577 VGCAD 591
CA+
Sbjct: 767 ENCAE 771
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 550 GQWDHGLCNIPRLTYKIVRELESHHQHL 467
G W HG+C + Y I+RE + Q L
Sbjct: 429 GDWGHGICILVSTLYLIIREKKFASQKL 456
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,037,202
Number of Sequences: 37544
Number of extensions: 462351
Number of successful extensions: 1295
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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