Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16c09
(726 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0820 + 23437811-23440230,23440336-23440534 124 7e-29
05_03_0648 + 16563147-16565557,16565655-16565850 120 9e-28
03_02_0662 - 10250235-10250433,10250692-10253105 120 2e-27
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 43 2e-04
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 36 0.033
08_02_0493 - 17770723-17770758,17770772-17770996,17771051-177720... 33 0.23
06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368... 32 0.40
01_06_1801 - 39954425-39954533,39955289-39955578,39955786-399568... 32 0.40
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 29 2.8
04_04_0451 - 25323178-25323241,25323614-25323741,25324533-253246... 29 5.0
01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 29 5.0
12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 28 6.6
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 8.7
04_04_0501 - 25681880-25683721,25683809-25684075,25685347-25685964 28 8.7
03_06_0522 - 34494989-34495045,34495171-34495234,34495378-344954... 28 8.7
>12_02_0820 + 23437811-23440230,23440336-23440534
Length = 872
Score = 124 bits (299), Expect = 7e-29
Identities = 76/205 (37%), Positives = 117/205 (57%), Gaps = 2/205 (0%)
Frame = +3
Query: 114 TLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGL 293
+L + Q+L SPD + A L N F+ LS+ L + +R AGL
Sbjct: 2 SLDITQVLLSAQSPDGATRKLAEESLKQFQEQNLPGFLFSLSNELANEEKPEESRRLAGL 61
Query: 294 QLKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQCVAYVAV 470
LKN L +K+ K + QRWLAL V+ IK +L + + S S+++Q +A VA
Sbjct: 62 ILKNALDAKEQHRKNELFQRWLALDVGVKAQIKGFLLQTLSSPVASARSTSSQVIAKVAG 121
Query: 471 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILTAI 647
E+P QW +LI L+ N+ VQ K+ATLE +GY+C+++ E + ++ N+ILTA+
Sbjct: 122 IEIPQKQWPELIASLLSNIHQVQPN--VKQATLETLGYLCEEVSPEAVDQDQVNKILTAV 179
Query: 648 IHGMRSTEPSNHVRLAATQALLNSL 722
+ GM ++E ++ VRLAAT+AL N+L
Sbjct: 180 VQGMNASEGNSDVRLAATRALYNAL 204
>05_03_0648 + 16563147-16565557,16565655-16565850
Length = 868
Score = 120 bits (290), Expect = 9e-28
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 2/205 (0%)
Frame = +3
Query: 117 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 296
+ + QIL S D N A L N F+ LS L +R AG+
Sbjct: 1 MNITQILLSAQSADGNLRVVAEGNLKQFQEQNLPNFLLSLSVELSDNEKPPESRRLAGII 60
Query: 297 LKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE-NSRPSSAAQCVAYVAVA 473
LKN L +KD K+ Q+W++L ++ IKE++L +G+ + +++Q +A VA
Sbjct: 61 LKNSLDAKDSAKKELLIQQWVSLDPSIKQKIKESLLITLGSSVHDARHTSSQVIAKVASI 120
Query: 474 ELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILTAII 650
E+P +W +LI L+ N+ + K+ATLEA+GY+C++I E L ++ N +LTA++
Sbjct: 121 EIPRREWQELIAKLLGNMTQQGAPAPLKQATLEALGYVCEEISPEHLEQDQVNAVLTAVV 180
Query: 651 HGMRSTEPSNHVRLAATQALLNSLE 725
GM TE S VRLAA +AL N+L+
Sbjct: 181 QGMNQTELSPEVRLAAVKALYNALD 205
>03_02_0662 - 10250235-10250433,10250692-10253105
Length = 870
Score = 120 bits (288), Expect = 2e-27
Identities = 70/206 (33%), Positives = 115/206 (55%), Gaps = 3/206 (1%)
Frame = +3
Query: 117 LTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQ 296
+ + Q+L S D A L NF F++ LS L N +R AG+
Sbjct: 1 MDITQVLLAAQSHDGQLRTVAEENLKQFQQQNFPHFLQTLSVELSNDENPPESRRLAGIL 60
Query: 297 LKNHLTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTE--NSRPSSAAQCVAYVAV 470
LKN L +K+ T K+++ QRW+ + ++ +KE++L +G+ +R SS +Q +A VA
Sbjct: 61 LKNSLDAKESTRKEEFVQRWMNVDPAIKSQVKESLLITLGSPVFEARRSS-SQVIAKVAA 119
Query: 471 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVL-TERSNQILTAI 647
E+P W +LI L+ N+ + K+ATL+ +GY+C++I E L ++ N +LTA+
Sbjct: 120 IEIPHQGWPELIVNLLTNMTKPDAPPCLKQATLDCLGYVCEEISPEDLEQDQVNAVLTAV 179
Query: 648 IHGMRSTEPSNHVRLAATQALLNSLE 725
+ GM E ++ VRLAA +AL N+L+
Sbjct: 180 VQGMNHVENNSDVRLAAVKALYNALD 205
>04_04_1693 +
35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 43.2 bits (97), Expect = 2e-04
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 2/162 (1%)
Frame = +3
Query: 132 ILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQG-GNSQVARMAAGLQLKNH 308
+L+ +SP+ ++ + ++ +F ++ L L +G G S AR AAGL LKN+
Sbjct: 21 LLDAHISPNSDQARIWQQLQHYSQFPDFNNYLVFL---LARGEGKSFEARQAAGLLLKNN 77
Query: 309 LTSKDPTLKQQYQQRWLALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAVAELPVG 488
L + ++ QQ Y+K +L IG N S V V + V
Sbjct: 78 LRATFSSMPPASQQ-----------YVKSELLPCIGATNKAIRSTVGTVISVLFQIVRVA 126
Query: 489 QWNDLIPILVENVVHVQSTEL-KKEATLEAIGYICQDIDAEV 611
W +L L + + S +L E ++AI IC+D+ E+
Sbjct: 127 GWIELFQALHQ---CLDSNDLDHMEGAMDAIYKICEDVPEEL 165
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 35.9 bits (79), Expect = 0.033
Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 330 LKQQYQQRWLALAEDVRLYIKENILAAIGTENSR--PSSAAQCVAYVAVAELPVGQWNDL 503
L+++ W L + +K+ ++ +I ++S ++A V+ +A +P G+W +L
Sbjct: 60 LRKKITSHWPKLPPHAKASLKQALIDSITIDHSHLVRRASANVVSIIAKYAVPAGEWPEL 119
Query: 504 IPILVENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEPSNH 683
+P + + Q E +E L + + I + ++ L I+ E S+
Sbjct: 120 LPFIFQCSQSPQ--EDHREVALILFSSLTETIGTTFQSHLND--LQPILLKCLQDEASSR 175
Query: 684 VRLAATQALLNSLE 725
VR+AA +A+ + +E
Sbjct: 176 VRIAALKAVGSFIE 189
>08_02_0493 -
17770723-17770758,17770772-17770996,17771051-17772033,
17772196-17772720,17772801-17772990
Length = 652
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +3
Query: 519 ENVVHVQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRSTEP---SNHVR 689
+ +V ++ +LK + LE + + ++T N +L +I+ +RS E S+HVR
Sbjct: 546 DQLVLQRAEKLKADKNLENLQISASIKNLGIITSSPNVVLDDVINDLRSMEENRLSDHVR 605
Query: 690 LAATQALLNSLE 725
L+ T+ N+++
Sbjct: 606 LSTTKGFSNNVD 617
>06_01_0510 +
3681369-3681645,3682825-3682886,3683016-3683165,
3683776-3683952,3684496-3684711,3684802-3686480,
3686602-3686667,3686753-3686822,3686909-3687547
Length = 1111
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 435 SSAAQCVAYVAVAELPVGQWN-DLIPILVENVVH-VQSTELKKEATLEAIGYICQDIDAE 608
+SA +C+ + + V + + +++ V+ + +T++K L Q+++A
Sbjct: 72 ASALKCLGFTLYHPVLVSTVSGQMAQSVLDTVIQLIMTTQMKAICNLGVWCISVQELEAV 131
Query: 609 VLTERSNQILTAIIHGMRSTEPSNHVRLAATQALL 713
V+ R+ +LTAI+H + + S A QA++
Sbjct: 132 VVDHRATSLLTAIVHAIDNPFCSLSTTFEAVQAIM 166
>01_06_1801 - 39954425-39954533,39955289-39955578,39955786-39956838,
39956998-39957263,39957345-39957420,39957525-39957605,
39957676-39957831,39958565-39958669,39958761-39959367,
39959514-39959585,39959802-39959953,39960063-39960240,
39960642-39960745,39960822-39960953,39961036-39961132,
39961280-39961407,39961533-39961592,39962799-39962918,
39963011-39963091,39963173-39963361,39963826-39964024,
39964177-39964257,39964398-39964588,39965226-39965382,
39965986-39966119,39966266-39966334,39966434-39966481,
39966572-39966646,39967112-39967192,39967399-39967461,
39967564-39967623,39967754-39967795,39968777-39968902,
39969027-39969176
Length = 1843
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = +3
Query: 273 ARMAAGLQLKNHLTSKDPTLKQQ-----YQQRWLALAEDVRLYIKENILAAIGTENSRPS 437
A++ G Q + LT+KD +++ + +++ A+ D + K+N LAA G++N PS
Sbjct: 1267 AKIVPGNQSADPLTAKDQSVRAKSIEGRHERSEAAMKPDAQQ--KKNALAANGSDNQMPS 1324
Query: 438 SAAQ 449
S+AQ
Sbjct: 1325 SSAQ 1328
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 357 LALAEDVRLYIKENILAAIGTENSRPSSAAQCVAYVAVAELPVGQWNDLIPILVENVVHV 536
L + + + + E + A IG + P + + E+P+GQ + VE V+H+
Sbjct: 165 LFIGRNFSIAMDEQLAAPIGFNITFPGMLSSVIEMGL--EVPIGQTD------VERVLHL 216
Query: 537 QSTELKKE 560
Q TELK+E
Sbjct: 217 QETELKRE 224
>04_04_0451 - 25323178-25323241,25323614-25323741,25324533-25324634,
25325314-25325382,25325489-25325557,25325646-25325720,
25325805-25325909,25326394-25326492,25326626-25328344,
25328629-25328931,25329031-25329129,25329733-25329850,
25329933-25330018,25330091-25330159,25330232-25330306,
25330675-25330772,25331271-25331432,25332391-25332556,
25332902-25332970,25333064-25333126,25333221-25333376,
25334027-25334365
Length = 1410
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +3
Query: 495 NDL-IPILVENVVH-VQSTELKKEATLEAIGYICQDIDAEVLTERSNQILTAIIHGMRST 668
N+L IP L+ + + + + L+K L+ + D D + + NQILTA++ + +
Sbjct: 1164 NELSIPQLLHQISNGTEVSSLEKREALQQLVKASVDNDISIWAKYFNQILTAVLEVLDDS 1223
Query: 669 EPS-NHVRLAATQALLNS 719
+ S + L+ +LN+
Sbjct: 1224 DSSTREIALSLVAEMLNN 1241
>01_05_0681 -
24242485-24242560,24242721-24242785,24242874-24243029,
24243073-24243121,24243291-24243366,24243456-24243666,
24244038-24244160,24244245-24244363,24244439-24244532,
24245123-24245233,24245336-24245392
Length = 378
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 30 RFLFFKKQD*VSLLQHKLKNSETMHAETTLTLIQILEKTVSPDRNELE 173
R+ K++ VS Q+ NS+ + T LTL++ +PD +ELE
Sbjct: 164 RYFCLAKREPVSF-QNPSDNSKLLRTPTFLTLVRAGHNRCNPDEDELE 210
>12_02_1200 +
26937624-26937674,26937913-26938005,26938582-26938728,
26940299-26940379,26940711-26940849,26940977-26941013,
26941095-26941202,26941434-26941533,26941638-26941783,
26941862-26941953,26942086-26942180,26942435-26942531,
26942623-26942766,26942912-26943129,26943213-26943323
Length = 552
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 75 HKLKNSETMHAETTLTLIQILEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDV 245
H +KN + H + + L T++ + L RYLD T + +K L DV
Sbjct: 456 HYMKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDV 512
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +3
Query: 225 IKMLSDVLLQGGNSQVARMAAGLQLKNHLTSKDPTLKQQYQQRWLAL 365
I+ + + ++GG +++A+ A+ + + T+ Q+Y WL L
Sbjct: 279 IENVKAITMRGGTNEIAKKASSSDSADKEDQPEKTVPQEYCDTWLLL 325
>04_04_0501 - 25681880-25683721,25683809-25684075,25685347-25685964
Length = 908
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 471 AELPVGQWNDLIPILVENVVHVQSTELKKEATLEAIGYICQDIDAE---VLTERSNQILT 641
AE+ V + L+ L + +++K+ LE +G D +++ +LT R ++ T
Sbjct: 239 AEITVKRARFLVKALSRKRFVLLLDDVRKKFRLEDVGIPTPDTNSQSKLILTSRFQELST 298
Query: 642 AIIHGMRSTEPSNHVR 689
+ S PSN VR
Sbjct: 299 EACAAVESPSPSNVVR 314
>03_06_0522 -
34494989-34495045,34495171-34495234,34495378-34495494,
34495878-34496032,34496221-34496319,34496464-34496593,
34496727-34496866,34497050-34497239,34497346-34497547,
34497589-34497631
Length = 398
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 135 LEKTVSPDRNELEAAVRYLDHAATTNFTTFIKMLSDVLLQGGNSQVARMAAGLQLKNHLT 314
+E+ SP+ + AV+ D + F+K ++ +++ + VAR AA +L +
Sbjct: 30 IEEAKSPNTSVAAVAVKNADASVYKIIHGFLKQKNNSIIKVA-ANVARKAASNKLSRKTS 88
Query: 315 SKDPTLKQQYQQRW 356
+L Q+ Q +W
Sbjct: 89 DVFDSLIQKQQSKW 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,890,417
Number of Sequences: 37544
Number of extensions: 342512
Number of successful extensions: 995
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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