Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16c09
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   3.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.5  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 493 HCPTGSSATATYAT 452
           HC TGS ATA Y T
Sbjct: 160 HCNTGSLATAGYGT 173


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 332  KCRIFRSEMIFQLQTSCHPSHLTVTTLEKDIG 237
            K R++ + + + LQ     S +  +TLE DIG
Sbjct: 1071 KDRLYDAYITYSLQDEHFVSQILTSTLENDIG 1102


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 326 RIFRSEMIFQLQTSCHPSHLTVTTLEKDIGQHFDEC 219
           R+ +S+  F  Q  C   HL     EK  G    EC
Sbjct: 347 RMAKSKRKFSQQNCCEQQHLPHVHSEKCAGTQTGEC 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,756
Number of Sequences: 2352
Number of extensions: 13581
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)