Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16c01
         (765 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060439-1|AAL25478.1|  205|Drosophila melanogaster LD46868p pro...   279   3e-75
AE013599-2116|AAF58102.2|  205|Drosophila melanogaster CG8253-PA...   279   3e-75
U31351-1|AAB97618.1|  810|Drosophila melanogaster protein ( Dros...    33   0.43 
BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p pro...    33   0.43 
AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adapti...    33   0.43 
AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3 delta-a...    33   0.43 
AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-P...    33   0.43 
AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p pro...    32   0.75 
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    32   0.75 
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    32   0.75 
AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p pro...    30   4.0  
AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-P...    30   4.0  
AY118881-1|AAM50741.1|  311|Drosophila melanogaster HL01355p pro...    29   5.3  
AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin ...    29   5.3  
AE014296-1748|AAN11931.2|  479|Drosophila melanogaster CG32052-P...    29   5.3  
AY058383-1|AAL13612.1|  224|Drosophila melanogaster GH14654p pro...    29   9.2  
AF179869-1|AAF64647.1|  224|Drosophila melanogaster glutathione ...    29   9.2  
AE013599-2676|AAF57701.1|  224|Drosophila melanogaster CG5164-PA...    29   9.2  

>AY060439-1|AAL25478.1|  205|Drosophila melanogaster LD46868p
           protein.
          Length = 205

 Score =  279 bits (684), Expect = 3e-75
 Identities = 118/190 (62%), Positives = 149/190 (78%)
 Frame = +3

Query: 129 LFPKREECSHVSCYCEENVWKLCQDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGREE 308
           LFPK  +CS+VSCYCEENVWKLC+ V    PEEL +CY VF+SN  RTVPLW+Q+AGR +
Sbjct: 6   LFPKISDCSYVSCYCEENVWKLCEQVKRTRPEELSKCYAVFVSNEGRTVPLWRQKAGRGD 65

Query: 309 DRLVIWDYHVIFLYSVDIKSCLVYDLDSELPFPTFFHKYVTETFRTDQVLKSDFHRFFRV 488
           D++VIWDYHV F+++  +  CLV+DLD+ LPFPT+FHKYVTETFR+D  L+ + HRFFRV
Sbjct: 66  DQVVIWDYHVFFIHNPLLNRCLVFDLDTTLPFPTYFHKYVTETFRSDLALRPEHHRFFRV 125

Query: 489 VTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQVYN 668
           + A  +L  FSSDRRHM+RPDGSWIKPPP YP I ++ + H L ++I M    GPG VY+
Sbjct: 126 IPADTYLIEFSSDRRHMRRPDGSWIKPPPSYPPILSNSNMHCLGDFICMSAGKGPGSVYS 185

Query: 669 LTDFVQRFYK 698
           L++FVQ FYK
Sbjct: 186 LSEFVQNFYK 195


>AE013599-2116|AAF58102.2|  205|Drosophila melanogaster CG8253-PA
           protein.
          Length = 205

 Score =  279 bits (684), Expect = 3e-75
 Identities = 118/190 (62%), Positives = 149/190 (78%)
 Frame = +3

Query: 129 LFPKREECSHVSCYCEENVWKLCQDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGREE 308
           LFPK  +CS+VSCYCEENVWKLC+ V    PEEL +CY VF+SN  RTVPLW+Q+AGR +
Sbjct: 6   LFPKISDCSYVSCYCEENVWKLCEQVKRTRPEELSKCYAVFVSNEGRTVPLWRQKAGRGD 65

Query: 309 DRLVIWDYHVIFLYSVDIKSCLVYDLDSELPFPTFFHKYVTETFRTDQVLKSDFHRFFRV 488
           D++VIWDYHV F+++  +  CLV+DLD+ LPFPT+FHKYVTETFR+D  L+ + HRFFRV
Sbjct: 66  DQVVIWDYHVFFIHNPLLNRCLVFDLDTTLPFPTYFHKYVTETFRSDLALRPEHHRFFRV 125

Query: 489 VTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPGQVYN 668
           + A  +L  FSSDRRHM+RPDGSWIKPPP YP I ++ + H L ++I M    GPG VY+
Sbjct: 126 IPADTYLIEFSSDRRHMRRPDGSWIKPPPSYPPILSNSNMHCLGDFICMSAGKGPGSVYS 185

Query: 669 LTDFVQRFYK 698
           L++FVQ FYK
Sbjct: 186 LSEFVQNFYK 195


>U31351-1|AAB97618.1|  810|Drosophila melanogaster protein (
           Drosophila melanogastergarnet mRNA, complete cds. ).
          Length = 810

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 528 RRHMKRPDG----SWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPG 656
           +R +  PDG     WI  PPP  A S+S S H+ DE        G G
Sbjct: 583 QRKVPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTG 629


>BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p
           protein.
          Length = 1034

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 528 RRHMKRPDG----SWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPG 656
           +R +  PDG     WI  PPP  A S+S S H+ DE        G G
Sbjct: 627 QRKVPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTG 673


>AF044287-1|AAC01743.1|  810|Drosophila melanogaster delta adaptin
           subunit of AP-3 protein.
          Length = 810

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 528 RRHMKRPDG----SWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPG 656
           +R +  PDG     WI  PPP  A S+S S H+ DE        G G
Sbjct: 583 QRKVPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTG 629


>AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3
           delta-adaptin subunit protein.
          Length = 1034

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 528 RRHMKRPDG----SWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPG 656
           +R +  PDG     WI  PPP  A S+S S H+ DE        G G
Sbjct: 627 QRKVPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTG 673


>AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-PB
           protein.
          Length = 1034

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 528 RRHMKRPDG----SWIKPPPPYPAISTSVSTHNLDEYINMDVDTGPG 656
           +R +  PDG     WI  PPP  A S+S S H+ DE        G G
Sbjct: 627 QRKVPLPDGLDLDEWINAPPPEDAASSSSSEHDKDELFVSATQAGTG 673


>AY113376-1|AAM29381.1| 1053|Drosophila melanogaster LP10764p
           protein.
          Length = 1053

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = +3

Query: 450 QVLKSDFHRFFRVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLD 620
           Q+ +++  R FR++T + F +L S+    +  PD + I PP    A STS+   +LD
Sbjct: 201 QICEAETLRVFRLITGQVFGKLISNVSSDLVPPDSAGIGPPSG-GAASTSLLADSLD 256


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = +3

Query: 450  QVLKSDFHRFFRVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLD 620
            Q+ +++  R FR++T + F +L S+    +  PD + I PP    A STS+   +LD
Sbjct: 4381 QICEAETLRVFRLITGQVFGKLISNVSSDLVPPDSAGIGPPSG-GAASTSLLADSLD 4436


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 32.3 bits (70), Expect = 0.75
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = +3

Query: 450  QVLKSDFHRFFRVVTAKQFLQLFSSDRRHMKRPDGSWIKPPPPYPAISTSVSTHNLD 620
            Q+ +++  R FR++T + F +L S+    +  PD + I PP    A STS+   +LD
Sbjct: 4381 QICEAETLRVFRLITGQVFGKLISNVSSDLVPPDSAGIGPPSG-GAASTSLLADSLD 4436


>AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p
           protein.
          Length = 1470

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 502 NFCNFFHQIDVI*KDQMVHGLNPHHPT 582
           N C F HQ  VI  ++ ++G++PH+ T
Sbjct: 201 NTCEFDHQKSVIIGNEAIYGMSPHNET 227


>AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-PA
           protein.
          Length = 1470

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 502 NFCNFFHQIDVI*KDQMVHGLNPHHPT 582
           N C F HQ  VI  ++ ++G++PH+ T
Sbjct: 201 NTCEFDHQKSVIIGNEAIYGMSPHNET 227


>AY118881-1|AAM50741.1|  311|Drosophila melanogaster HL01355p
           protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
 Frame = +3

Query: 417 HKYVTETFRTDQVLKSDFHRFFRVVTAKQFLQLFSSDRRHMKRPDG---SWIKPPPPYPA 587
           H  +T T R +Q       RF  V+  + F  L S   R +    G   SW+   P    
Sbjct: 80  HNQLTFTERNNQRYLDMVRRFAPVIQGQFFGHLHSDTFRLIYDAKGNPISWLMIAPSIVP 139

Query: 588 ISTSVSTHNLDEYINMDVDTGPGQVYNLTDF 680
               + + N         DTG GQV + T F
Sbjct: 140 RKAGIGSSNNPALRLYKFDTGSGQVLDYTQF 170


>AF454393-1|AAL51006.1|  705|Drosophila melanogaster follistatin
           protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 499 FAVTTRKNLWKSDLRTWSVRKVSVTYLWKNVGNGNSESRSYTRQDLISTEY 347
           F +T     W++ L +    +V  T + ++   G+S+S SYT ++L S EY
Sbjct: 144 FRLTAAGTCWQTHLGSGKCGQVFSTDISRSECCGSSQSFSYTDRELSSVEY 194


>AE014296-1748|AAN11931.2|  479|Drosophila melanogaster CG32052-PA
           protein.
          Length = 479

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
 Frame = +3

Query: 417 HKYVTETFRTDQVLKSDFHRFFRVVTAKQFLQLFSSDRRHMKRPDG---SWIKPPPPYPA 587
           H  +T T R +Q       RF  V+  + F  L S   R +    G   SW+   P    
Sbjct: 248 HNQLTFTERNNQRYLDMVRRFAPVIQGQFFGHLHSDTFRLIYDAKGNPISWLMIAPSIVP 307

Query: 588 ISTSVSTHNLDEYINMDVDTGPGQVYNLTDF 680
               + + N         DTG GQV + T F
Sbjct: 308 RKAGIGSSNNPALRLYKFDTGSGQVLDYTQF 338


>AY058383-1|AAL13612.1|  224|Drosophila melanogaster GH14654p
           protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 198 QDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGREEDRLVIWDYHVIFLYSVD 359
           ++V+L+  E L   YV    NP  TVP+       +++   IWD H I  Y VD
Sbjct: 34  KEVNLQAGEHLSEEYVK--KNPQHTVPML------DDNGTFIWDSHAIAAYLVD 79


>AF179869-1|AAF64647.1|  224|Drosophila melanogaster glutathione
           S-transferase protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 198 QDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGREEDRLVIWDYHVIFLYSVD 359
           ++V+L+  E L   YV    NP  TVP+       +++   IWD H I  Y VD
Sbjct: 34  KEVNLQAGEHLSEEYVK--KNPQHTVPML------DDNGTFIWDSHAIAAYLVD 79


>AE013599-2676|AAF57701.1|  224|Drosophila melanogaster CG5164-PA
           protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +3

Query: 198 QDVSLRVPEELDRCYVVFISNPCRTVPLWKQRAGREEDRLVIWDYHVIFLYSVD 359
           ++V+L+  E L   YV    NP  TVP+       +++   IWD H I  Y VD
Sbjct: 34  KEVNLQAGEHLSEEYVK--KNPQHTVPML------DDNGTFIWDSHAIAAYLVD 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,086,232
Number of Sequences: 53049
Number of extensions: 842211
Number of successful extensions: 2230
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2226
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)