Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16c01
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.25
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.58
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 25 0.77
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 24 1.3
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.4
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 22 7.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 7.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 7.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 7.2
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 26.6 bits (56), Expect = 0.25
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +2
Query: 434 NFSHRPSPQIRFPQVLSCCDCKTISATFFIR*TSYEKTRWFMD*TPTTLPSNKHFSLNTQ 613
N++ R R PQ++ K + +R + RW M+ TLP++ + T+
Sbjct: 319 NWNFRGPRTHRMPQLIRKIFLKYLPTILMMRRPKKTRLRWMMEIPNVTLPTSTYSGSPTE 378
Query: 614 L 616
L
Sbjct: 379 L 379
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.58
Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 340 YSCILW-ISSLVLYMILIQNYHFQHFSTN 423
++CI++ ++S V+ ILI NYH ++ T+
Sbjct: 298 FNCIMFMVASSVVSTILILNYHHRNADTH 326
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 25.0 bits (52), Expect = 0.77
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 249 KRHSIYPIPRVLSMKRLGKVSKRFPHNNRTHENI 148
+R I+ +PR+L M+R SKR +++R I
Sbjct: 342 RRVFIHVLPRLLVMRRYNTPSKRSDYDSRPQYQI 375
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Frame = -3
Query: 499 FAVTTRKNLWKSDLRT-WS-VRKVSVTYLWKN 410
F V K++W SDLRT +S VR ++ T+ + N
Sbjct: 204 FRVDAAKHMWPSDLRTIYSRVRNLNRTHGFPN 235
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 570 PPPYPAISTSVSTHNLDEY 626
PP P + + T N DEY
Sbjct: 641 PPIMPRVQNATDTTNFDEY 659
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 548 RWFMD*TPTTLPSNKHFSLNTQ 613
RW ++ T ++ NKH +L+ Q
Sbjct: 711 RWIVEPTDVSVERNKHVALHCQ 732
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 548 RWFMD*TPTTLPSNKHFSLNTQ 613
RW ++ T ++ NKH +L+ Q
Sbjct: 707 RWIVEPTDVSVERNKHVALHCQ 728
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 448 SVRKVSVTYLWKNVGNGNSESRSYTRQDLISTEYRNIT 335
S + ++TY+WKN +S S T + + + IT
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTIT 245
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 448 SVRKVSVTYLWKNVGNGNSESRSYTRQDLISTEYRNIT 335
S + ++TY+WKN +S S T + + + IT
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTIT 245
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 448 SVRKVSVTYLWKNVGNGNSESRSYTRQDLISTEYRNIT 335
S + ++TY+WKN +S S T + + + IT
Sbjct: 259 SYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTIT 296
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 448 SVRKVSVTYLWKNVGNGNSESRSYTRQDLISTEYRNIT 335
S + ++TY+WKN +S S T + + + IT
Sbjct: 208 SYEQTAITYVWKNDEGTLRKSPSLTSLNAYLIKNQTIT 245
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 612 NLDEYINMDVDT 647
N+DEY N D+DT
Sbjct: 370 NIDEYNNNDLDT 381
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 426 HICGKMLEMVILNQDHIQDKT 364
H+CGK L Q HI+ T
Sbjct: 46 HLCGKAFSRPWLLQGHIRTHT 66
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
Frame = +2
Query: 398 TISNIFPQICNRN-------FSHRPSPQIRFPQVLS 484
TI+ + PQ+C+ N + RP ++ F +LS
Sbjct: 233 TITRVIPQVCSGNCKLNDILLTVRPHLELTFENILS 268
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 456 GLGLCEKFLLHICGKMLEMVILNQDH 379
G+G + LLH C +M M + N ++
Sbjct: 451 GMGETIEDLLHFCRQMYAMKVNNAEY 476
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
Frame = +2
Query: 398 TISNIFPQICNRN-------FSHRPSPQIRFPQVLS 484
TI+ + PQ+C+ N + RP ++ F +LS
Sbjct: 233 TITRVIPQVCSGNCKLNDILLTVRPHLELTFENILS 268
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,581
Number of Sequences: 438
Number of extensions: 5851
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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