Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16b21
(580 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.71
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 25 0.71
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.71
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.71
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 1.6
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 2.9
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 2.9
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 2.9
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 5.0
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 6.7
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 6.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 6.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.7
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 21 6.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 6.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 8.8
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.71
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 195 HVPLFERVRNKQYI 154
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.6 bits (51), Expect = 0.71
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 429 KYQILLYHFVLFNN*RIQRHIYIPN 503
+Y +L+Y F ++ RIQ H + P+
Sbjct: 332 RYGLLIYDFFKDSSFRIQHHFFYPD 356
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.71
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 195 HVPLFERVRNKQYI 154
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.71
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 195 HVPLFERVRNKQYI 154
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 265 NRHCNTSHLQLHCNFSNMY 209
N++CN L + NF+N Y
Sbjct: 92 NKNCNAGSLTVKKNFANKY 110
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNMYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 83 SHTRLSCDCDDKFYDCLKNSA 103
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNMYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 2.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -1
Query: 247 SHLQLHCNFSNMYYKCISRPA 185
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 234 YTVIFQICIINVFHVPLFERVRN-KQYI 154
+T + +ICI + L E +RN +YI
Sbjct: 323 FTTVHRICIGETMPMELIENLRNHPEYI 350
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 94 GLFFAQPGILCVTPHSSHSI 35
GL G++CV S HSI
Sbjct: 67 GLKLLSDGLMCVEKDSIHSI 86
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 6.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 169 PNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCLAV 276
P A + K +Y+ L NY+ + + N D L V
Sbjct: 13 PGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTV 48
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 247 SHLQLHCNFSNMYY 206
S L CN+SN YY
Sbjct: 305 SSLSNSCNYSNNYY 318
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 494 YS*YNKISRTYKNTRTFSNK*N 559
YS YN + Y N ++N N
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYN 345
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 107 LYRPRFIFCATRHFVRH 57
+YRP + T+ F+RH
Sbjct: 6 VYRPTIVKKRTKKFIRH 22
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 269 KQSPLQHIAPSITL 228
+QSP QH+ P TL
Sbjct: 1007 QQSPQQHVLPGKTL 1020
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 8.8
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 190 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTDMEVLESLEYTS 345
D K +Y+ L NY+ + + N D + VV L Q D+ + + + T+
Sbjct: 20 DAKRLYDDLLSNYNRLIRPVSNNNDTV-VVKLGLRLSQLIDLNLKDQILTTN 70
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.0 bits (42), Expect = 8.8
Identities = 19/76 (25%), Positives = 31/76 (40%)
Frame = -3
Query: 434 VFIYTQFFW*YLL*LSTITHTFLHNNSTLSLVYSKLSNTSMSVFCS*FRSNTTTAKQSPL 255
+F+ T F + Y + + I + + S + L + + RSN T+ QS
Sbjct: 210 IFVATIFTFSYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVDSLRSNANTSSQSAE 269
Query: 254 QHIAPSITL*FFKYVL 207
IA + F YVL
Sbjct: 270 IRIAKAAITICFLYVL 285
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,749
Number of Sequences: 438
Number of extensions: 4353
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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