Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc16a08
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 239 8e-63
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 239 8e-63
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 239 8e-63
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 237 3e-62
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 229 7e-60
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 152 1e-36
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 150 4e-36
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 77 6e-14
AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein. 33 0.93
BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein. 31 3.7
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 30 6.5
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 182
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 183 VEKKIDKYTEVLKTHG 198
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 239 bits (584), Expect = 8e-63
Identities = 107/196 (54%), Positives = 143/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 237 bits (579), Expect = 3e-62
Identities = 106/196 (54%), Positives = 142/196 (72%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+RNKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 229 bits (560), Expect = 7e-60
Identities = 103/196 (52%), Positives = 140/196 (71%)
Frame = +2
Query: 41 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNV 220
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+RNKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 221 NPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 400
+P+RGP+HFRAPS++ W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 401 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEK 580
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A +
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAEKN 184
Query: 581 VSKATTPFTTIIQSYG 628
V K +T +++++G
Sbjct: 185 VEKKIDKYTEVLKTHG 200
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 152 bits (368), Expect = 1e-36
Identities = 66/138 (47%), Positives = 92/138 (66%)
Frame = +2
Query: 215 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 394
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 395 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 574
LKP R + ++GRL+HE+GWKY+ V LEDKRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 575 EKVSKATTPFTTIIQSYG 628
+ V K +T +++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 150 bits (364), Expect = 4e-36
Identities = 65/138 (47%), Positives = 92/138 (66%)
Frame = +2
Query: 215 NVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 394
N NP+RGP+HFRAPS+I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 395 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAG 574
LKP R + ++GRL+HE+GWKY+ V LE+KRK KA +K+L R+ K A
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLMRLRKQAE 121
Query: 575 EKVSKATTPFTTIIQSYG 628
+ V K +T +++++G
Sbjct: 122 KNVEKKIDKYTEVLKTHG 139
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 77.0 bits (181), Expect = 6e-14
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +2
Query: 287 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 466
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 467 WKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 589
WKY+ V LE+KRK KA +K+L R+ K A + V K
Sbjct: 61 WKYQAVTATLEEKRKEKAKIHYWKKKQLMRLRKQAEKNVKK 101
>AB011181-1|BAA25535.3| 769|Homo sapiens KIAA0609 protein protein.
Length = 769
Score = 33.1 bits (72), Expect = 0.93
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 78 AVWRQSSPRSFSKGTKLLWFAANKSTSLATSLGTNSSLCHSCVRGAT*ILLVDLSIL 248
+ WRQS PR + +G + L A ++ T+L + T+ + C RG L LS+L
Sbjct: 30 SAWRQSRPREYYEGGRGL-HAPDRETALGLGIATSERMLGIC-RGRRKFLAASLSLL 84
>BC004907-1|AAH04907.2| 551|Homo sapiens EPS8-like 1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 428 NYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLK 553
NY R S E+ K RDV+ LEDK K ++ V ++K K
Sbjct: 500 NYDFQARNSSELSVKQRDVLEVLEDKEKVSELEAVMEKQKKK 541
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 30.3 bits (65), Expect = 6.5
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +2
Query: 494 LEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGYN*D*E 646
L+ R+GK KR A +K++ K G+ S A +PF + + SY YN D E
Sbjct: 566 LKSSREGKH-KRAAKTRKMEVGFKARGQPKS-AHSPFASEVSSYSYNTDSE 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,906,155
Number of Sequences: 237096
Number of extensions: 2317926
Number of successful extensions: 19522
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19507
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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