Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16a01
         (757 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129990-1|AAI29991.1|  695|Homo sapiens nuclear fragile X menta...    33   1.1  
BC108307-1|AAI08308.1|  695|Homo sapiens nuclear fragile X menta...    33   1.1  
AY232289-1|AAP69984.1|  695|Homo sapiens proliferation-inducing ...    33   1.1  
AJ493465-1|CAD38278.1|  695|Homo sapiens FMRP interacting protei...    33   1.1  
AB037742-1|BAA92559.1|  714|Homo sapiens KIAA1321 protein protein.     33   1.1  
AK126104-1|BAC86442.1|  988|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>BC129990-1|AAI29991.1|  695|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 2 protein.
          Length = 695

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 516 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 689
           N +  K+D IP  N     N     N    +  D+D    +   TTP+++    N+ K  
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234

Query: 690 ETLNIESDIIKTEQTDAP 743
           E LNI  D I  ++T  P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252


>BC108307-1|AAI08308.1|  695|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 2 protein.
          Length = 695

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 516 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 689
           N +  K+D IP  N     N     N    +  D+D    +   TTP+++    N+ K  
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234

Query: 690 ETLNIESDIIKTEQTDAP 743
           E LNI  D I  ++T  P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252


>AY232289-1|AAP69984.1|  695|Homo sapiens proliferation-inducing
           gene 1 protein.
          Length = 695

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 516 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 689
           N +  K+D IP  N     N     N    +  D+D    +   TTP+++    N+ K  
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234

Query: 690 ETLNIESDIIKTEQTDAP 743
           E LNI  D I  ++T  P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252


>AJ493465-1|CAD38278.1|  695|Homo sapiens FMRP interacting protein,
           82kD protein.
          Length = 695

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 516 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 689
           N +  K+D IP  N     N     N    +  D+D    +   TTP+++    N+ K  
Sbjct: 175 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 234

Query: 690 ETLNIESDIIKTEQTDAP 743
           E LNI  D I  ++T  P
Sbjct: 235 ENLNIVQDKIMQQETSVP 252


>AB037742-1|BAA92559.1|  714|Homo sapiens KIAA1321 protein protein.
          Length = 714

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +3

Query: 516 NSNKIKADLIPDEND--PKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIKPF 689
           N +  K+D IP  N     N     N    +  D+D    +   TTP+++    N+ K  
Sbjct: 194 NQSVDKSDTIPIPNGVVTNNSGYITNGYMGKGADNDGSGSESGYTTPKKRKARRNSAKGC 253

Query: 690 ETLNIESDIIKTEQTDAP 743
           E LNI  D I  ++T  P
Sbjct: 254 ENLNIVQDKIMQQETSVP 271


>AK126104-1|BAC86442.1|  988|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44116 fis, clone TESTI4046884. ).
          Length = 988

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +3

Query: 429 IKMKI-NLCNIQFQSLINLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEE- 602
           +KM I NL +IQ Q L+N   L     + + S+K +++ I  + + +N+ LR++S   + 
Sbjct: 304 VKMPIENLSSIQ-QKLLNKKRLPKLQPLKMFSDKSESNTINFKENIQNILLRVHSFHSQL 362

Query: 603 CTDDDNFSIDLPLTTPEQKDDFMNAIKPFETLNIESDIIKTE 728
            T   N   D+      + D+ ++ ++P     ++ +I+ +E
Sbjct: 363 LTYAVNIISDMLAVIKNKLDNEISQMEPSSISILKENIVASE 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,812,900
Number of Sequences: 237096
Number of extensions: 1653660
Number of successful extensions: 11660
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11660
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)