Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc16a01
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81564-5|CAB04569.1|  656|Caenorhabditis elegans Hypothetical pr...    31   0.67 
AL033514-19|CAA22104.1|  696|Caenorhabditis elegans Hypothetical...    29   4.7  
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z82051-4|CAB04818.2|  339|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    28   8.2  
AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical...    28   8.2  

>Z81564-5|CAB04569.1|  656|Caenorhabditis elegans Hypothetical
           protein K05C4.5 protein.
          Length = 656

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
 Frame = +3

Query: 477 NLLNLQATTIMSLNSNKIKADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQ 656
           ++L++++ T++S     +KA+    EN+   + +    + EE   + +    +  +   +
Sbjct: 558 SILDVESGTVVSAQDGPLKANKKQRENEDTRLLVNGMRLREEVEQNGD---GMSPSKRTR 614

Query: 657 KDDFMNAIKPFETLNIESDIIKTEQT--DAPATSG 755
           ++ F N I PF+++N  S I++ E T  + P T+G
Sbjct: 615 RNSFKNEIPPFQSMN--SRIVQLEVTGDEIPKTAG 647


>AL033514-19|CAA22104.1|  696|Caenorhabditis elegans Hypothetical
           protein Y75B8A.19 protein.
          Length = 696

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 163 VINMFLNDEIENDKIYKL 216
           V+ +FLNDE+ NDK+Y L
Sbjct: 206 VVEIFLNDELLNDKLYIL 223


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +1

Query: 175 FLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVT 303
           F  D+  N+KIYK V TV     L+R ++     AL +  S T
Sbjct: 207 FFRDKRNNEKIYKEVVTVKKIQLLTRMRISLSAEALGSESSHT 249


>Z82051-4|CAB04818.2|  339|Caenorhabditis elegans Hypothetical
           protein T23D5.7 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 481 KLIKD*NCILHKFIFIFIYLTINTPAIGMLRPVL 380
           K++ D    LHK IF  + L I TP I +  P++
Sbjct: 236 KMVSDQERKLHKQIFKTLMLQITTPTIVLFSPII 269


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 519 SNKIKADLIPDENDPKNVTLRLNSVPEECTDDDNFSIDLPLTTPEQKDDFMNAIK 683
           + K K D   DE  P+N    + +   E  +DDN S D      E+++ F+  +K
Sbjct: 312 AGKSKFDSSSDEESPENEKFPVGNGKSEYQEDDNDSED---DLEERREQFIRCVK 363


>AC084197-23|AAM44389.1|  610|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.33 protein.
          Length = 610

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 546 PDENDPKNVTLRLNSVPEECTDDD 617
           PD N   N  +RL  VP  C +DD
Sbjct: 149 PDSNGEVNHVIRLRGVPWSCKEDD 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,210,153
Number of Sequences: 27780
Number of extensions: 301707
Number of successful extensions: 861
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)