Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15p21
         (542 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.    31   2.0  
AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated prot...    31   2.0  
BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated prot...    30   6.0  
BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated prot...    30   6.0  
AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated prot...    30   6.0  

>BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.
          Length = 194

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 353 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTP 529
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP 127


>AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +2

Query: 353 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTP 529
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP 127


>BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 347 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 514
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 515 RCCTP 529
            CC P
Sbjct: 123 VCCVP 127


>BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 347 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 514
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 515 RCCTP 529
            CC P
Sbjct: 123 VCCVP 127


>AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated protein
           protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = +2

Query: 347 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 514
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 515 RCCTP 529
            CC P
Sbjct: 123 VCCVP 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,977,912
Number of Sequences: 237096
Number of extensions: 1599444
Number of successful extensions: 7441
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7437
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)