Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15p08
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 85 8e-17
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 85 1e-16
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 85 1e-16
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 82 9e-16
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 76 6e-14
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 75 1e-13
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.4 bits (202), Expect = 8e-17
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.0 bits (201), Expect = 1e-16
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 81.8 bits (193), Expect = 9e-16
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
Frame = +3
Query: 114 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 281
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 282 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGR 428
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GR
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGR 156
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 75.8 bits (178), Expect = 6e-14
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 326
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 327 KIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 96
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 74.9 bits (176), Expect = 1e-13
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 138 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 317
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 318 TQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGRH 431
T++ R S G +PFS+HVR++R ++ GT+ I+L GRH
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRH 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,318,931
Number of Sequences: 237096
Number of extensions: 1212246
Number of successful extensions: 2524
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2511
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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