Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15o08
(432 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 25 0.31
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 1.2
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 1.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 3.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 5.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 5.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 5.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 5.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 5.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 5.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 5.0
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 6.6
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 6.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 20 8.8
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 25.0 bits (52), Expect = 0.31
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +1
Query: 169 GYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRAL-LTVW 345
G K + ++ +P+ K+N E E + V + + HGL L +W
Sbjct: 135 GIKLSINIILSDPNTNKLKLNTNESYELTVLKSDSLAVRLSAANFFGARHGLETLNQLIW 194
Query: 346 AEHMSEDCR 372
+ + + R
Sbjct: 195 FDEVVNELR 203
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 139 SKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVE 249
S P HL GY + + R PD+ KIN K ++
Sbjct: 594 SHPFHLH---GYAFNVVGIGRSPDQNVKKINLKHALD 627
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 22.6 bits (46), Expect = 1.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 139 SKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVE 249
S P HL GY + + R PD+ KIN K ++
Sbjct: 594 SHPFHLH---GYAFNVIGIGRSPDQNVKKINLKHALD 627
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 3.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSSTEKAGTNNNNSKSSQS 194
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 97 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 150
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 5.0
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = -1
Query: 429 TGFSESLLLAFVPVFVEATSTVFRHMLRPDSQQSA*SMRGLNVSNNTDTNHRRS 268
+G + L ++ P ATST +++ P S S+ S +NN ++ +S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 231 VDF*TGTVRFSNHVG 187
+DF T TVR N VG
Sbjct: 5 MDFDTRTVRLRNRVG 19
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.6
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1
Query: 136 PSKPVHLTAFIGYKAG 183
P +P+H ++ GY G
Sbjct: 75 PFRPMHQNSYTGYHLG 90
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 20.2 bits (40), Expect = 8.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 394 TSFCRSDVDSLQTYAPPR 341
+ F ++VDSL TYA R
Sbjct: 311 SDFNATEVDSLVTYAGER 328
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,033
Number of Sequences: 336
Number of extensions: 2213
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9565283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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