Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15o08
         (432 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   1.2  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   8.1  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    22   8.1  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 294 CWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEG 413
           C  + D SW++  VDC    Y  RL   +     Q+  +G
Sbjct: 762 CTCYHDQSWSSNVVDCSRAGYDDRLPDQIPMDSTQIYLDG 801


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +1

Query: 319 GLRALLTVWAEHMSEDCRRRFYK 387
           G+R   ++WAE +  +CR+++ +
Sbjct: 770 GIRYASSIWAESLKFECRKQWLR 792


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 294 CWIH*DPSWTTRSVDCLGGAY 356
           C  + D SW+T  V+C    Y
Sbjct: 798 CACYHDNSWSTNIVECSAAGY 818


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 139 SKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVE 249
           S P HL    GY   +  + R PD    KIN K  ++
Sbjct: 636 SHPFHLH---GYAYNVVGIGRSPDSNVKKINLKHALD 669


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 290 PTQTIGGVSMMVTASTISFLLIFEPGRSGSLTTWV 186
           PT TI   S + T S+I  ++  E  +   +  W+
Sbjct: 153 PTMTIADFSCISTISSIMGVVPLEQSKHPRIYAWI 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,725
Number of Sequences: 2352
Number of extensions: 9955
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)