Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15o06
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 136 7e-33
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 32 0.17
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.30
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 29 0.92
08_02_0478 + 17621678-17623768 28 2.1
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 28 2.1
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 28 2.8
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 28 2.8
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 2.8
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 27 3.7
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 27 3.7
05_03_0039 - 7621613-7622695 27 4.9
04_03_0350 + 14755619-14755692,14755697-14755883,14755964-147560... 27 4.9
04_01_0360 - 4720997-4721812 27 4.9
08_01_0995 - 10079140-10079314,10080069-10080086,10081362-10081600 27 6.5
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 27 6.5
05_07_0009 - 27015346-27015705,27016552-27016676,27016778-270168... 27 6.5
05_03_0033 - 7585267-7586028 27 6.5
01_06_1475 + 37634831-37636297 27 6.5
10_02_0141 + 5761931-5762020,5762170-5762201,5762453-5762604,576... 26 8.6
08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579 26 8.6
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 26 8.6
02_05_1127 + 34292894-34293284,34293948-34295443 26 8.6
01_01_0325 + 2631637-2631882,2632715-2632788,2632874-2633006,263... 26 8.6
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 136 bits (328), Expect = 7e-33
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Frame = +3
Query: 3 ESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVK 182
ESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N Y+++A RHVLLRQGVLGIKVK
Sbjct: 130 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVK 189
Query: 183 IMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 299
IML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 190 IMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 146 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARA 277
A +T S R G++ + P R+E + T RP PG+ + A A
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAA 498
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 31.1 bits (67), Expect = 0.30
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 209 QERPEEATTRPHPGNRAQGRARAPR 283
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 29.5 bits (63), Expect = 0.92
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 114 NDYVNTATRHVLLR----QGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPK 263
++ +N H+ +R QGVL +++ + +Q +NGP+K + L+TE K
Sbjct: 359 SERINGIVNHLRIRGNPVQGVLQLEILRQIALPKQSQNGPRKSRLTISLMTEHK 412
>08_02_0478 + 17621678-17623768
Length = 696
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 72 KFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 167
K + GL+IHSG ND+V+++ + + G++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGII 452
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 146 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAP 280
A + R+TRN G A + RP + T + G A AP
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAP 1205
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 344 DSGDRLRQRRGREGAHFAGRLEGHGLVLG 258
+ GD+ + +G EG +G GHG V+G
Sbjct: 164 EEGDKGMKVKGEEGCRASGSDSGHGCVIG 192
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 156 QGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 299
Q VL I+ K + + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 219 PKKPQPDHILVTEPKDEPVPLEPTS 293
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 105 LQSGS*VHLQTSLIWHVDHAACQIQQLHNHGH 10
+QSG+ LIWH+ + C+I+ H H
Sbjct: 753 IQSGAPRCSHVILIWHIATSLCEIKLAQEHDH 784
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 137 QTCASQTRSTRNQGQNHVAVGPARQERPEEATTR-PHPGNRAQGRARAPRADQ 292
Q C + +HV P ++ RP + +R P R R RA R +Q
Sbjct: 861 QPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRTRARRGNQ 913
>05_03_0039 - 7621613-7622695
Length = 360
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 192 PWDRQGKNGPK-KPQPDHILVTEPKDEPVPLEP 287
P + + K PK KP P H EPK EP P EP
Sbjct: 53 PPELEPKPKPKPKPHPKHESKPEPKPEPKP-EP 84
>04_03_0350 +
14755619-14755692,14755697-14755883,14755964-14756072,
14756157-14756379,14756716-14756794,14757222-14757273,
14757354-14757416,14757519-14757616,14757970-14758031,
14758066-14758159,14758430-14758509,14758617-14758686,
14758807-14758864,14758973-14759037,14759127-14759221,
14759318-14759402
Length = 497
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 232 CGFFGPFLPCRSHGNMILTLIPSTPCLRSTCLVAVLT*SLQGSPEW 95
C F P P H ++ L+PS C T +A L G P++
Sbjct: 314 CYRFSPEFPVIIHNELMFLLLPSCSCFDYTNGLADLVVGYMGVPKY 359
>04_01_0360 - 4720997-4721812
Length = 271
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 344 DSGDRLRQRRGREGAHFAGRLEGHGL 267
D G R RQR G G A R +G GL
Sbjct: 168 DGGRRRRQRDGEAGVEAAARGDGDGL 193
>08_01_0995 - 10079140-10079314,10080069-10080086,10081362-10081600
Length = 143
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 212 ERPEEATTRPHPGNRAQGRARAPRAD 289
+ ++ T P P +R G AR PRAD
Sbjct: 48 DNDDDKATLPPPQHRGGGAARPPRAD 73
>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 136 PDMCFSDKEY*ESRSKSCCRGTGKARTARRSHN 234
PD SD EY E S R + K R+ RRS +
Sbjct: 962 PDTDSSDHEYEERHKSSSRRSSDKDRSRRRSRH 994
>05_07_0009 -
27015346-27015705,27016552-27016676,27016778-27016853,
27016923-27017105,27018000-27018077,27018159-27018239,
27018347-27018412,27018491-27018556,27019126-27019176,
27019286-27019378,27019498-27019625,27019713-27019851,
27021039-27021136,27021332-27021401,27021565-27021654
Length = 567
Score = 26.6 bits (56), Expect = 6.5
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 117 DYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 296
+YV A R V +R+ L + +++L + + + P P P +EPVP+ P +E
Sbjct: 305 EYVREAPRMVPVREP-LELPERLLLTYKPEEQEEDSVPDPVEE-EKPPVEEPVPVPPVTE 362
Query: 297 VRS 305
S
Sbjct: 363 AVS 365
>05_03_0033 - 7585267-7586028
Length = 253
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 204 QGKNGPK-KPQPDHILVTEPKDEPVPLEPTSE 296
+ K+ PK +P+P L EPK EP EP SE
Sbjct: 128 EAKSEPKSEPKPKSELYAEPKSEP-KSEPQSE 158
>01_06_1475 + 37634831-37636297
Length = 488
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -1
Query: 244 MWSGCGFFGPFLPCRSHGNMILTLIPSTPCLRSTC 140
+W+ CG PF P RS T + PC C
Sbjct: 124 VWTACGATAPFNPVRS------TTVADVPCTDDAC 152
>10_02_0141 +
5761931-5762020,5762170-5762201,5762453-5762604,
5763688-5763770,5764689-5764766,5764884-5764979,
5765076-5765345
Length = 266
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 182 NHVAVGPARQERPEEATTRPHPGNRAQGR 268
NH + G ++Q+RP +A + P +GR
Sbjct: 210 NHDSSGLSQQQRPADAERKRRPSQMGRGR 238
>08_02_0840 + 21715077-21716962,21717541-21717814,21718265-21718579
Length = 824
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Frame = -2
Query: 117 HCKGLQSGS*VHL-QTSLIWHVDHA-----ACQIQQLHNH 16
H GS + + +TSL+WH + A +CQ ++L +H
Sbjct: 657 HYSDATDGSYIEVKETSLVWHYEEADPDFGSCQAKELQDH 696
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +3
Query: 117 DYVNTATRHVLLRQGVLGIKVKIMLPWDRQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 296
+YV A V + VL I+ K + + + P P+P+ EP+ EPV E E
Sbjct: 287 EYVTEAPT-VAQKDKVLAIEYKKEAEEEEKPASPPPAPEPEPEQEPEPEPEPVKEEAPKE 345
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 TCASQTRSTRNQGQNHVAVG--PARQERPEEATTRPHPGNRAQGRARAPRADQ 292
TC++ T + ++ +A P R P T R HP + A A R ++
Sbjct: 26 TCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLER 78
>01_01_0325 +
2631637-2631882,2632715-2632788,2632874-2633006,
2633091-2633172,2633471-2633580,2633659-2633751,
2633854-2633904,2634013-2634105,2635257-2636129,
2636204-2636316,2636436-2636448
Length = 626
Score = 26.2 bits (55), Expect = 8.6
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 6 SGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP-CNDYVNTATRHVLLRQGVLGIKVK 182
SG G + G+ R RA K + + P ++ V T +++ R G L +
Sbjct: 57 SGGGGGRRLRHGRGRRARAFRRKLEEENKNSNNRPRASNVVIAYTPNLIRRYGTLLRNIS 116
Query: 183 IMLPWDRQGK 212
+LP+D QGK
Sbjct: 117 FLLPYDGQGK 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,166,537
Number of Sequences: 37544
Number of extensions: 208632
Number of successful extensions: 860
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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