Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15n09
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p pro...    83   2e-16
AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA...    82   5e-16
AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA ...    77   2e-14
AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p pro...    72   7e-13
AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA...    72   7e-13
AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-P...    45   9e-05

>AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p
           protein.
          Length = 89

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
 Frame = +3

Query: 24  GVLTKVFIKNRFR-IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWG 200
           G++   F +   R + Q  LILTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R WG
Sbjct: 19  GIICPFFARGPNRGVTQCCLILTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMAREWG 78

Query: 201 NKINNTQA 224
           N+I +T A
Sbjct: 79  NEIKDTMA 86


>AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA
           protein.
          Length = 89

 Score = 82.2 bits (194), Expect = 5e-16
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
 Frame = +3

Query: 24  GVLTKVFIKNRFR-IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWG 200
           G++   F +   R + Q  L+LTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R WG
Sbjct: 19  GIICPFFARGPNRGVTQCCLMLTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMAREWG 78

Query: 201 NKINNTQA 224
           N+I +T A
Sbjct: 79  NEIKDTMA 86


>AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA
           protein.
          Length = 85

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = +3

Query: 63  IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 209
           +I+ +L+LTAA CWLFWLC YMAQMNPLIGP+L  + +  I R+W N I
Sbjct: 34  LIRCILMLTAACCWLFWLCCYMAQMNPLIGPKLKRDVVAMIGRSWNNPI 82


>AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p
           protein.
          Length = 84

 Score = 71.7 bits (168), Expect = 7e-13
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 63  IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 209
           +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+  I+ +WGN I
Sbjct: 33  LVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTIRIIASSWGNPI 81


>AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA
           protein.
          Length = 84

 Score = 71.7 bits (168), Expect = 7e-13
 Identities = 25/49 (51%), Positives = 38/49 (77%)
 Frame = +3

Query: 63  IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 209
           +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+  I+ +WGN I
Sbjct: 33  LVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTIRIIASSWGNPI 81


>AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-PA
           protein.
          Length = 88

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 17/49 (34%), Positives = 29/49 (59%)
 Frame = +3

Query: 63  IIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 209
           +I+  +ILTA  C+L W+  ++ Q+NPL GPR   + ++ +   W   I
Sbjct: 33  LIRCCVILTAVCCYLAWMVTFVMQLNPLTGPRAKQKIILGMITYWPRSI 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,741,373
Number of Sequences: 53049
Number of extensions: 425552
Number of successful extensions: 685
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)