Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15n03
(554 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 62 4e-11
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 57 2e-09
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 56 3e-09
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 56 3e-09
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 50 2e-07
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 48 7e-07
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 46 3e-06
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 46 3e-06
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 43 3e-05
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 41 1e-04
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 39 6e-04
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 38 8e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 37 0.002
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 34 0.012
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 33 0.021
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 31 0.11
SPAC56F8.05c |mug64||conserved fungal protein|Schizosaccharomyce... 27 1.9
SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces po... 27 1.9
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 27 2.5
SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces po... 27 2.5
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 3.2
SPCC613.06 |rpl902|rpl9-2|60S ribosomal protein L9|Schizosacchar... 26 3.2
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 26 4.3
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 26 4.3
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.3
SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces pomb... 25 7.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 7.5
SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 25 9.9
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 25 9.9
SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyce... 25 9.9
SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 9.9
SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces p... 25 9.9
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 62.5 bits (145), Expect = 4e-11
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +1
Query: 166 LKGKVAIVTASTEGIGYAIAKRLGHEGASV-VISSRKEDNVENAVKSLRSDGITVEGIVC 342
LKGK ++T + GIG++IAK G++V ++ R + +E A + G+ + C
Sbjct: 7 LKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 343 HVANSDHRKKLFEVAKSKFGG-LDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWL 519
+ N + A + GG LD++++NA + + + +E +W K+ IN+ ++
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYY 126
Query: 520 LAQEA 534
AQ A
Sbjct: 127 TAQAA 131
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 57.2 bits (132), Expect = 2e-09
Identities = 33/120 (27%), Positives = 60/120 (50%)
Frame = +1
Query: 166 LKGKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCH 345
LKGK +V + +GIG++IA G +V+I+ D E A K G+ V +
Sbjct: 19 LKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKID 78
Query: 346 VANSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLA 525
++ SD + E + F + ++V+NA + P +L++ ++K+ IN S + +A
Sbjct: 79 ISRSDTVEAGVEEIQKIFKEIHVVVANAGM-PFRRSVLDSPPHEFEKVMNINTNSVYRVA 137
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 56.4 bits (130), Expect = 3e-09
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Frame = +1
Query: 163 RLKGKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVC 342
+L K ++T GIG A A EG+ +VIS E+ + V D I EG C
Sbjct: 39 KLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTR---DLIEREGRNC 95
Query: 343 HV-----ANSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVK 507
+ SD+ + L + A K G +D+LV+N A I + D++ WD F+ N+
Sbjct: 96 WIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIF 155
Query: 508 SSWLLAQEA 534
S + + + A
Sbjct: 156 SFFWVTKAA 164
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 56.4 bits (130), Expect = 3e-09
Identities = 39/126 (30%), Positives = 59/126 (46%)
Frame = +1
Query: 175 KVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVAN 354
KV ++T S++GIG A A+ L + + +S +E + + V+G V V
Sbjct: 7 KVILLTGSSKGIGLATAEALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDVTEVG- 65
Query: 355 SDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLAQEA 534
K E A KFG LD ++ NA V ++ I + D W K+F+IN S + A
Sbjct: 66 ----KASIETAIKKFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVKYA 121
Query: 535 YPELIK 552
P L K
Sbjct: 122 IPHLRK 127
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 50.0 bits (114), Expect = 2e-07
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +1
Query: 166 LKGKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCH 345
L GKVA+VT S+ GIGY A L +GA V ++ R E+ + +K + D + I
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIH-DEVRHSKIRFL 98
Query: 346 VANSDHRKKLFEVAKS---KFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSW 516
+ + +++ A+S K L ILV+NA + ++P E + ++ + N S +
Sbjct: 99 RLDLLDFESVYQAAESFIAKEEKLHILVNNAGI---MNPPFELTKDGYELQIQTNYLSHY 155
Query: 517 LLAQEAYPEL 546
L + P L
Sbjct: 156 LFTELLLPTL 165
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 48.4 bits (110), Expect = 7e-07
Identities = 29/126 (23%), Positives = 56/126 (44%)
Frame = +1
Query: 175 KVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVAN 354
K+ + GIG ++ K L + +VV +S ++ ++ V I V++
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVSS 65
Query: 355 SDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLAQEA 534
+ + + +D+L N+AV + P++ T + VW+ ++ NV + Q
Sbjct: 66 LESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAF 125
Query: 535 YPELIK 552
YP LIK
Sbjct: 126 YP-LIK 130
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 46.4 bits (105), Expect = 3e-06
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +1
Query: 175 KVAIVTASTEGIGYAIAKRLG-HEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVA 351
KV + GIG ++ K L EG +V S+RK + + +S V+ + V
Sbjct: 6 KVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHP-NVKTVELDVT 64
Query: 352 NSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLAQE 531
+ + + G+D+L N+ + + ++E E+VW+ ++ NV + +
Sbjct: 65 SQQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKA 124
Query: 532 AYPELIK 552
YP L K
Sbjct: 125 FYPLLTK 131
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 46.4 bits (105), Expect = 3e-06
Identities = 26/126 (20%), Positives = 56/126 (44%)
Frame = +1
Query: 175 KVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVAN 354
K+ + GIG ++ K L + +VV +S ++ ++ V I +++
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATELQEWSKSHSNVHIIKLDISS 65
Query: 355 SDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLAQEA 534
+ + + G +D+L N+ + + + +L T + VW+ ++ NV + Q
Sbjct: 66 LESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVYQAF 125
Query: 535 YPELIK 552
YP L+K
Sbjct: 126 YP-LVK 130
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 42.7 bits (96), Expect = 3e-05
Identities = 33/125 (26%), Positives = 54/125 (43%)
Frame = +1
Query: 166 LKGKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCH 345
LKGK A+V GIG+AI GA+ I + A + +++G+ C
Sbjct: 19 LKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQANGVKTYTCKCD 78
Query: 346 VANSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLA 525
V + F + F +DI+V N + S I T E+ ++I +N+ + +A
Sbjct: 79 VTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAIDMTYEEFANEI-NVNLLGVFNVA 137
Query: 526 QEAYP 540
A P
Sbjct: 138 HNAGP 142
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 41.1 bits (92), Expect = 1e-04
Identities = 26/127 (20%), Positives = 55/127 (43%)
Frame = +1
Query: 172 GKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVA 351
G V ++ GIG ++ K L ++ V +S + + +K V I V
Sbjct: 6 GIVYVIVGGNRGIGLSLVKELSNKEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVT 65
Query: 352 NSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLLAQE 531
+ K + +D+L N+ ++ + P+L+T +++W ++ NV + +
Sbjct: 66 SLRSAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGP-IHVYQ 124
Query: 532 AYPELIK 552
A+ L+K
Sbjct: 125 AFYHLLK 131
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 38.7 bits (86), Expect = 6e-04
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +1
Query: 166 LKGKVAIVTASTEGIGYAIAKRLGHEGASVV-ISSRKEDNVENAVKSLRSDGITVEGIVC 342
++G+V ++T + GIG + K G V I V++A +L++D
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDRVAGIDIVDPSKVQDAALALQAD--------- 53
Query: 343 HVANSDHRKKLFEVAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSSWLL 522
V+ +D + E G +D+L++NA + +P + + WD + ++ ++L
Sbjct: 54 -VSKADQIETAIEKVIQTLGPIDVLINNAGLADD-TPFEQLSHESWDHDVSLVLRGNYLT 111
Query: 523 AQEAYPELIK 552
+ P + K
Sbjct: 112 QRYVIPHMAK 121
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 38.3 bits (85), Expect = 8e-04
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +1
Query: 169 KGKVAIVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHV 348
KG A+VT +T+GIG A +L G +VV+ SR ++ ++ K L TV +
Sbjct: 56 KGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQEKLDALAKELE----TVAKVKTRT 111
Query: 349 ANSDHRK---KLFEVAKSKFGG--LDILVSNAAVNPTV-SPILETDEQVWDKIFEIN 501
D+ K + FE G + +L++N + + + ET + D I IN
Sbjct: 112 IAIDYTKTTAETFEKLHQDLVGTPITVLINNVGQSHYMPTSFAETTVKEMDDIMHIN 168
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 37.1 bits (82), Expect = 0.002
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +1
Query: 184 IVTASTEGIGYAIAKRLGHEGASVVISSRKEDNV---ENAVKSLRSDGITVEGIVCHVAN 354
++T S++G+GYA+ K +G +V+ SR D + + + L+ D V+ +
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSV------ 62
Query: 355 SDHRKKLFEVAKSKFGGLDILVSNA 429
+ F+ AK +FG +DI+++NA
Sbjct: 63 ----ETAFKDAKRRFGNVDIVINNA 83
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 34.3 bits (75), Expect = 0.012
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 184 IVTASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLRSDGI 321
+VT ++G+G AIAK L GA+V I +R ++ AV L I
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVARTVTKLQEAVAELSDSKI 71
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 33.5 bits (73), Expect = 0.021
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 40 KFKHISTHGS--LRVMFRLKFIRSLMNTKMSKTPNFVRANHNDRLKGKVAIVTASTEGIG 213
K++H+ TH + + + I + +T + R ++ G V +VT + GIG
Sbjct: 34 KYEHLITHWAQYTKAAIAVSTIAAFKFWTSGRTTTWER-----KMNGMVVMVTGGSSGIG 88
Query: 214 YAIAKRLGHEGASVVISSRKE 276
+ ++L GA VVI R E
Sbjct: 89 QVVVEKLASLGAQVVILLRTE 109
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 31.1 bits (67), Expect = 0.11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 340 CHVANSDHRKKLFEVAKSKFGGLDILVSN 426
CH +N RK+L + +K FGG+ + V N
Sbjct: 34 CHYSNRARRKRLVQRSKETFGGITLPVKN 62
>SPAC56F8.05c |mug64||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 1.9
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 226 KRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVANSDHRKKLFEVAKSKFGG 405
KRL E A + + S K +N+E+ ++RS + G + +H K L+E +K
Sbjct: 215 KRLQLEMAKLDVESAKPENLEHCKSAVRSAEDELNGAI------EHAKILYEQILNKDYN 268
Query: 406 LDILVS 423
D+L S
Sbjct: 269 TDLLRS 274
>SPAC1296.06 |||NADPH cytochrome reductase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +1
Query: 190 TASTEGIGYAIAKRLGHEGASVVISSRKEDNVENAVKSLR 309
T + EG+ ++ + L G V+++S + N+EN ++ L+
Sbjct: 14 TGTAEGLAESLFRSLTRMGYDVLVNSMDDFNLENLLRPLQ 53
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/52 (23%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 391 SKFGGLDILVSNAAVNPTVSPILETDEQVWDKIF---EINVKSSWLLAQEAY 537
S+FG + ++ + ++NP+ S ++ T E + ++ EI + +W++ E +
Sbjct: 190 SEFGDVGLMTGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVH 241
>SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 2.5
Identities = 27/96 (28%), Positives = 39/96 (40%)
Frame = +1
Query: 226 KRLGHEGASVVISSRKEDNVENAVKSLRSDGITVEGIVCHVANSDHRKKLFEVAKSKFGG 405
KRL + + KED +L V G + +V N HR+ +S+
Sbjct: 176 KRLEKVANKIRVDWEKEDAAVLLGIALTGWSEQVPGRL-YVCNYCHRRLGVWNLQSEGQD 234
Query: 406 LDILVSNAAVNPTVSPILETDEQVWDKIFEINVKSS 513
D+L + P V P TD W +IFE+ K S
Sbjct: 235 FDVLEEHKKSCPWVIPQPFTDLLGWQQIFELLCKES 270
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 244 GASVVISSRKEDNVENAVKSLRSDGITVEGI--VCHVANSDHRKKLFEVAKSKFGGLDIL 417
G +V ISS +D + SL + + I +C+V N D RK L + S+ G ++ L
Sbjct: 129 GVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEEL 188
>SPCC613.06 |rpl902|rpl9-2|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 189
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 244 GASVVISSRKEDNVENAVKSLRSDGITVEGI--VCHVANSDHRKKLFEVAKSKFGGLDIL 417
G +V ISS +D + SL + + I +C+V N D RK L + S+ G ++ L
Sbjct: 129 GVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNIEEL 188
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 497 ISNILSHTCSSVSKIGETVGLTAAFDTRISKPPNLLLATSNN 372
+ +IL+H S + +V A ++ PP L +ATS N
Sbjct: 370 LKDILNHYSKSYNLQNPSVSTAAGTPLYLASPPALQVATSKN 411
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 364 YDLNLQHDKLFLLL*YHRCVSF*LRFQHYLLFYCL*RLKRLHDP 233
Y+ NL +LF L CV Q Y FYCL R + P
Sbjct: 107 YETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSIFDRYYKP 150
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 4.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 408 GYSCVECGSQSNSFSYFRDG*TSMGQDIRNKCKEFMAISPRSVP*VN 548
G+ C S+ + SYF+DG S+ +I+ + SP++ VN
Sbjct: 540 GFHITPCNSEEEARSYFKDGTDSLITNIQIRTSLNRYKSPQAPQNVN 586
>SPBC725.04 |||oxalyl-CoA decarboxylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 169 KGKVAIVTASTEGIG--YAIAKRLGHEGASVVI 261
+G++ T ST G+G YAIA H +V+
Sbjct: 411 RGRLDAGTMSTMGVGMGYAIASAFAHSSDKIVV 443
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.0 bits (52), Expect = 7.5
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 254 SS*AVEKKIMLKTQLKAYAAMVLQ*KE*FVMLQIQIIEKNCLKWLKASLVAWIFLCRMRQ 433
SS A+EK M T+L A +E ++L QI+EK LK VA + +
Sbjct: 256 SSHAIEKLYMALTKLSRLGACDKLLEEGSIILVKQILEKE----LKELPVACYSIINLHD 311
Query: 434 SIQQF 448
S+ QF
Sbjct: 312 SLTQF 316
>SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 559
Score = 24.6 bits (51), Expect = 9.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 404 AWIFLCRMRQSIQQFLLF*RRMNKYGTRYSK 496
+W+F+C + S+ F +N + TRY K
Sbjct: 264 SWVFMCALNSSVAGFSTLAVNVNDF-TRYVK 293
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 511 NSLHLFRISCPILVHPSLK*EKLLD*LPH 425
N +H F +CP H KLLD +PH
Sbjct: 250 NEVHTFHATCPSCSHQCDTHMKLLD-IPH 277
>SPAC5H10.03 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 219
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 238 HEGASVVISSRKEDNVENAVKSLRSDGITVEGIVC 342
H V++S + E K L S I ++GIVC
Sbjct: 27 HNIRDPVLTSEGIEQCEALAKELESKQIPIDGIVC 61
>SPAC19G12.13c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 139 FVRANHNDRLKGKVAIVTASTEGIGYAIAKRLGHE 243
F++ NH D + + +IV A +GY +K + HE
Sbjct: 18 FIKENHYDMQREESSIVNACLRYLGY--SKSMCHE 50
>SPCC1840.06 |atp5||F0-ATPase delta subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 216
Score = 24.6 bits (51), Expect = 9.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 382 VAKSKFGGLDILVSNAAVNPTVSPILETDEQVWDKIFEINVKS 510
+AKSK+G +LVSN + ++ ++ D I +++V S
Sbjct: 164 IAKSKYGKGKLLVSNKVTPSIIGGLI---VEIGDNILDVSVGS 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,264,464
Number of Sequences: 5004
Number of extensions: 45568
Number of successful extensions: 163
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 231978230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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