Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15m16
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 78 5e-15
10_08_0435 + 17905728-17905901,17906608-17906931,17907205-179073... 38 0.004
07_01_0101 - 752935-753223,753311-753408,753674-753764,753844-75... 31 0.44
03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477 31 0.77
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 30 1.0
06_03_0791 - 24641350-24641418,24641684-24641965,24642318-246425... 29 1.8
04_04_1153 - 31294014-31294095,31294180-31294261,31294422-312948... 29 3.1
04_01_0492 + 6476586-6476873,6477414-6477686,6477769-6477948,647... 29 3.1
10_01_0078 - 1012031-1012084,1012998-1013105,1013610-1013661,101... 28 4.1
09_01_0180 + 2632507-2634870 28 4.1
06_01_0422 + 3034556-3034777,3034859-3035138,3036398-3036483,303... 28 4.1
08_01_0512 + 4468486-4469306,4470165-4470255,4470938-4471054 27 7.2
02_05_0625 + 30453521-30453890,30454215-30454352,30454458-304547... 27 7.2
01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099... 27 7.2
06_01_1093 - 8970996-8971667,8971756-8971902,8971982-8972118,897... 27 9.5
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 27 9.5
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 77.8 bits (183), Expect = 5e-15
Identities = 43/123 (34%), Positives = 69/123 (56%)
Frame = +1
Query: 52 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNS 231
+ L++ ++ ++ +A+K A ++L AP ++ A CKVV ++ ++ALA + A+
Sbjct: 26 FTTLHRHIEAGEFPQAVKVADQVLAAAPGDEDAVRCKVVAHIKSDAIEKALAAIRAAER- 84
Query: 232 ALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRD 411
L DL + KAY YR N +EAL + E T A+ +L +QI YRL + DC N Y
Sbjct: 85 -LPIDLSYCKAYCYYRQNKLQEALDLLKGQEE-TSAILQLESQIYYRLGRMNDCMNSYEK 142
Query: 412 LLK 420
L K
Sbjct: 143 LQK 145
>10_08_0435 +
17905728-17905901,17906608-17906931,17907205-17907321,
17908418-17908597,17909064-17909190,17909327-17909440,
17909794-17909909
Length = 383
Score = 38.3 bits (85), Expect = 0.004
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 8/118 (6%)
Frame = +1
Query: 49 AYLELNKFCQSSDYERALKAAGKILQIAPNEQKA----FHC---KVVCFLQLHNFKEALA 207
A E NKF + +YERAL LQIA + A C + VCFL+L + E +
Sbjct: 214 AKAEGNKFFGAGEYERALSQYETALQIAAELESAEDIRSACHSNRAVCFLKLGKYDETIK 273
Query: 208 TLTNA-KNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLE 378
T A + + L + +L EA+ + EL P+ E + L+RLE
Sbjct: 274 ECTKALELNPSYLKALLRRGEAHEKLEHYDEAIADMKKIIELDPS-NEQAKRSLFRLE 330
>07_01_0101 -
752935-753223,753311-753408,753674-753764,753844-753882,
754019-754110,754535-754634,754742-754828,754949-755250,
756036-756242,756319-756405,756978-757058,757257-757365,
758037-758093,758188-758258,758414-758521,758874-758974,
759111-759177,759434-759535,759618-759662,759916-760511,
761956-762065,762165-762280
Length = 984
Score = 31.5 bits (68), Expect = 0.44
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +1
Query: 91 ERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAY 267
E+ L K+LQI + KA+H + + + + + A+ L+ A K+ + + L+ +A
Sbjct: 424 EKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIECLYLRAS 483
Query: 268 TQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLY 405
+ + K A++ D +L L + +L L YQ LY
Sbjct: 484 CHHAIGEYKAAIKDYDDVLDL--ELDSMDKFVLQCLAFYQKEIALY 527
>03_02_0727 - 10742899-10744375,10744470-10744933,10745412-10745477
Length = 668
Score = 30.7 bits (66), Expect = 0.77
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +1
Query: 298 ALQTVDSAPELTPALK---ELRAQILYRLEQYQDCYNLYRDLL 417
AL VD+A EL+P ++ ELR + L L +Y+D + RD +
Sbjct: 49 ALGLVDAALELSPRMESALELRGRALLSLRRYRDVAEMLRDYI 91
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = +1
Query: 64 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 243
N+F + Y A+K + L+ P + + + + C+ +L E L +
Sbjct: 571 NEFFKQQKYPEAVKHYSEALRRNPKDPRVYSNRAACYTKLGAMPEGL----KDAEKCIEL 626
Query: 244 DLLFEKAYT-----QYRLNSPKEALQTVDSAPELTPALKEL 351
D F K YT Q+ + +AL+T + + P +EL
Sbjct: 627 DPTFSKGYTRKGAIQFFMKEYDKALETYQAGLKHDPNNQEL 667
>06_03_0791 -
24641350-24641418,24641684-24641965,24642318-24642537,
24642657-24642776,24643056-24643132,24643220-24643339,
24644121-24644186,24644265-24644479,24645450-24645582,
24646562-24646708,24647301-24647596,24648222-24648319,
24648425-24648471,24649340-24649449,24649663-24649735,
24650795-24650899
Length = 725
Score = 29.5 bits (63), Expect = 1.8
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Frame = +1
Query: 64 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA-KNSALA 240
+++ DYE ++K LQ+ A++ V +L+ F+ A A + + +
Sbjct: 535 HEYSALEDYENSIKLYRSALQVDERHYNAWYGLGVVYLRQEKFEFAEHHFRRAFQINPCS 594
Query: 241 ADLLFEKAYTQYRLNSPKEALQTVDS---APELTPALKELRAQILYRLEQYQD 390
+ L+ + L +EAL+ +++ A + P K +A IL L++Y D
Sbjct: 595 SVLMCYLGMALHALKRNEEALEMMENAIFADKKNPLPKYQKALILLGLQKYPD 647
>04_04_1153 -
31294014-31294095,31294180-31294261,31294422-31294857,
31295124-31295312,31296190-31296360
Length = 319
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 133 PNEQKAFHC-KVVCFLQLHNFKEALATLTNA-KNSALAADLLFEKAYTQYRLNSPKEALQ 306
P ++ A H + C+L+LH+F +A T+ + A L +A T L + AL
Sbjct: 35 PAQRIALHSNRAACYLKLHDFHKAAEECTSVLELDREHAGALMLRAQTLVTLKDYQSALF 94
Query: 307 TVDSAPELTPALKELR 354
V+ E+ P+ + R
Sbjct: 95 DVNRLIEINPSSEVYR 110
>04_01_0492 +
6476586-6476873,6477414-6477686,6477769-6477948,
6478436-6478696,6479171-6479303,6479404-6479494,
6479921-6480023,6480557-6480660,6480809-6480902,
6480985-6481140,6481224-6481286,6481388-6481453,
6481670-6481870,6481999-6482076,6482165-6482284,
6482382-6482462,6482548-6482633,6482920-6483031,
6483093-6483170,6483306-6483482
Length = 914
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 268 TQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEY 438
T Y + A++ ++ +T +LKE A++ QY +LY +LLK E+
Sbjct: 535 TLYSASPVISAIEPQLNSSSMTDSLKEALAELYVINSQYDKALSLYAELLKPEVFEF 591
>10_01_0078 -
1012031-1012084,1012998-1013105,1013610-1013661,
1013926-1016603
Length = 963
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 70 FCQSSDYERALKAAGKILQIAPNEQKAFHCKV-VCFLQLHNFKEALATLTNAKNSALAAD 246
+C+ + E AL G++ + A + + VC ++ KEA ATL LA D
Sbjct: 478 YCKIGEIESALHLFGEMAKDGIEPSIAVYDSIIVCLCRMRRLKEAEATLRQMIREGLAPD 537
Query: 247 -LLFEKAYTQYRL 282
+++ Y L
Sbjct: 538 EIIYTSLINGYSL 550
>09_01_0180 + 2632507-2634870
Length = 787
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 58 ELNKFCQSSDYERALKAAGKILQIAPN---EQKAFHC-KVVCFLQLHNFKEALATLTNAK 225
E N+ QS DY AL+ L++AP ++ FH + C LQL +
Sbjct: 65 EGNRLFQSRDYGGALRQYELALRLAPRGHPDRAVFHSNRAACLLQLRPVDH--KAVAEEC 122
Query: 226 NSALAADLLFEKA 264
+ AL A+ LF +A
Sbjct: 123 SLALQAEPLFPRA 135
>06_01_0422 +
3034556-3034777,3034859-3035138,3036398-3036483,
3036614-3036837,3036911-3036971,3037634-3037828,
3037981-3038205
Length = 430
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 100 LKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALAT 210
L+ A K +++ P K + CK +HN+++A+ T
Sbjct: 215 LEDADKCIEVDPTFWKGYFCKGEVQFLMHNYEDAMTT 251
>08_01_0512 + 4468486-4469306,4470165-4470255,4470938-4471054
Length = 342
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 280 LNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLKNTTD 432
L++ + ALQ + + EL P +K+ R ++ +DC + + + + D
Sbjct: 47 LSTMRAALQMLADSEELNPRMKDWRDKVRELAYDMEDCIDAFTSRVDHNND 97
>02_05_0625 +
30453521-30453890,30454215-30454352,30454458-30454727,
30454844-30454983,30455067-30455213,30455319-30456008
Length = 584
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 174 KAYHFAMKCFLLIWCYLQYFPCSF*SSFIVTALAKFI 64
K Y + + FLL +CY+ + FI TA+++F+
Sbjct: 183 KPYEYGFRVFLLTFCYVTVSGYNT-GKFIATAISRFL 218
>01_06_1486 -
37709159-37709377,37709558-37709821,37709903-37709995,
37710387-37710581,37710665-37710763,37710884-37711132,
37711264-37711467,37711543-37711602,37711731-37711913,
37712382-37712999,37713101-37713169,37713275-37713853
Length = 943
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 224 LALVNVARASLKLWSWRKHTTLQ--*NAFCSFGAI-CSIFPAAFK 99
+ +V V SL +W W K T LQ + CS + C AFK
Sbjct: 194 MLVVTVISFSLAIWQWMKATVLQEKIRSCCSVSTVDCKTTTEAFK 238
>06_01_1093 -
8970996-8971667,8971756-8971902,8971982-8972118,
8972343-8972612,8972731-8972868,8974965-8975394
Length = 597
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 174 KAYHFAMKCFLLIWCYLQYFPCSF*SSFIVTALAKFI 64
KAY + + FLL +CY+ + F TA+++FI
Sbjct: 203 KAYEYGFRVFLLTFCYVMVSGYNT-GKFTDTAVSRFI 238
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 289 PKEALQTVDSAPELTP 336
PK L+ +DS+PELTP
Sbjct: 319 PKTVLEVMDSSPELTP 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.129 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,954,538
Number of Sequences: 37544
Number of extensions: 237770
Number of successful extensions: 660
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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