Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15m16
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.1  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   2.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   4.9  
AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical prote...    23   4.9  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    23   6.4  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   8.5  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = -3

Query: 463 PCWLSSHLH-THQWCSSV 413
           PCW+  HLH   QW   V
Sbjct: 442 PCWIEIHLHGPLQWLDKV 459


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 475 LQQRPCWLSSHLH 437
           +++ PCW+  HLH
Sbjct: 719 IKETPCWVEVHLH 731


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 120  TADSTK*AESISLQSGMLSPTPQLQGGS 203
            T+ ++   ++ SLQ+G+LSP   L G +
Sbjct: 3274 TSSTSGYRDNYSLQTGLLSPDGSLSGNA 3301


>AJ297930-1|CAC35450.1|  104|Anopheles gambiae hypothetical protein
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 124 QIAPNEQKAFHCKVVCFLQLH 186
           ++AP EQ+   C   CF   H
Sbjct: 79  KLAPTEQEIHSCSPACFCSNH 99


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 13  KMSANKENNLVQAYLELNKFCQSSDYERALK 105
           K++A   +   QAY EL + CQ +  ER  K
Sbjct: 57  KLAACVVSEHEQAYRELKQRCQEAHDERTAK 87


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 451 SSHLHTHQWCSSVDHGINCSSLGIALSGIKFEPLIPLKRVSIQGHYQQ 308
           + +LH HQ  SS     + SS+  + S     P  PL  V  + ++ +
Sbjct: 100 TGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPLSLVMKKPYHDE 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,530
Number of Sequences: 2352
Number of extensions: 9376
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)