Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15m13
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   9.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.5  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 588 NELDYRLKNVPKELKFRYTK 529
           NE+++R+ N P     RYT+
Sbjct: 391 NEVNFRILNAPVNQLIRYTR 410


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 355 KSFFKYNGWNEQLRFCRTEKFCSLVNLQLNK 263
           K FFK     +    CR EK C +   Q N+
Sbjct: 131 KGFFKRTVRKDLSYACREEKSCIIDKRQRNR 161


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 355 KSFFKYNGWNEQLRFCRTEKFCSLVNLQLNK 263
           K FFK     +    CR EK C +   Q N+
Sbjct: 131 KGFFKRTVRKDLSYACREEKSCIIDKRQRNR 161


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 207 LQSGIKRWCSCAQFFK 160
           + +G+  W SC+ FF+
Sbjct: 409 VNAGMWMWLSCSSFFQ 424


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -3

Query: 457 KIMEWNANRGFDESNKILHVYIGQYYKSSCRRI 359
           KI+   +NR    +N   + Y    Y ++C+++
Sbjct: 80  KIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKL 112


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 499 NDDNLQWPSLMNNKKIMEW 443
           N +++QWP L  N+K + +
Sbjct: 506 NVNSVQWPRLNPNEKSLHY 524


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -3

Query: 385 YYKSSCRRIKKSFFKYNGWNEQLRFCRTEKFCSLVNLQLNKDGSKKLKR 239
           Y   SC   K  F +      Q R C   + CS++ +  N+    +LK+
Sbjct: 79  YGVHSCEGCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKK 127


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 499 NDDNLQWPSLMNNKKIMEW 443
           N +++QWP L  N+K + +
Sbjct: 506 NVNSVQWPRLNPNEKSLHY 524


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,773
Number of Sequences: 438
Number of extensions: 3411
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)