Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15m02
         (580 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   9.5  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -1

Query: 496  VVLQNPLRDHLSVHLQRESYYLD*QPLRHYQNPYFLCFLLSL 371
            V + NPL D     L  +S+ +D +  +H+ +   + FL +L
Sbjct: 1746 VYMDNPLEDKSIQSLPGKSFAIDGRFAQHFSSIQGIDFLTNL 1787


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 16/58 (27%), Positives = 21/58 (36%)
 Frame = +2

Query: 50  NNCSLFYLL*IVRQTLLLIVKQSACSFITHISNKCMYCES*ICF*PWRFVRLRSIYLT 223
           NN    Y L   +    L+ +    S       KC+ C S I      F  L  +YLT
Sbjct: 48  NNMQSMYELDAAKFFTALVNEVDQVSANLPNKRKCLLCRSAIMLRDQNFQNLTQLYLT 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,284
Number of Sequences: 2352
Number of extensions: 10686
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)