Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15m02
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89053-1|BAA37142.1|  720|Homo sapiens Acyl-CoA synthetase 3 pro...    29   9.0  
BC041692-1|AAH41692.1|  720|Homo sapiens acyl-CoA synthetase lon...    29   9.0  
AB061712-1|BAB72074.1|  720|Homo sapiens Acyl-CoA synthetase 3 p...    29   9.0  
AB061436-1|BAB72139.1|  720|Homo sapiens Acyl-CoA synthetase 3 p...    29   9.0  

>D89053-1|BAA37142.1|  720|Homo sapiens Acyl-CoA synthetase 3
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -1

Query: 418 LRHYQNP---YFLCFLLSLMNHLSYVPF 344
           L+H  NP   YF+ FL+SL   L+Y+PF
Sbjct: 14  LKHTINPILLYFIHFLISLYTILTYIPF 41


>BC041692-1|AAH41692.1|  720|Homo sapiens acyl-CoA synthetase
           long-chain family member 3 protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -1

Query: 418 LRHYQNP---YFLCFLLSLMNHLSYVPF 344
           L+H  NP   YF+ FL+SL   L+Y+PF
Sbjct: 14  LKHTINPILLYFIHFLISLYTILTYIPF 41


>AB061712-1|BAB72074.1|  720|Homo sapiens Acyl-CoA synthetase 3
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -1

Query: 418 LRHYQNP---YFLCFLLSLMNHLSYVPF 344
           L+H  NP   YF+ FL+SL   L+Y+PF
Sbjct: 14  LKHTINPILLYFIHFLISLYTILTYIPF 41


>AB061436-1|BAB72139.1|  720|Homo sapiens Acyl-CoA synthetase 3
           protein.
          Length = 720

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = -1

Query: 418 LRHYQNP---YFLCFLLSLMNHLSYVPF 344
           L+H  NP   YF+ FL+SL   L+Y+PF
Sbjct: 14  LKHTINPILLYFIHFLISLYTILTYIPF 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,837,247
Number of Sequences: 237096
Number of extensions: 1321794
Number of successful extensions: 1969
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)