Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15m01
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039729-1|AAH39729.1| 516|Homo sapiens RIOK3 protein protein. 72 1e-12
AF013591-1|AAC26080.1| 519|Homo sapiens homolog of the Aspergil... 72 1e-12
BC028360-1|AAH28360.1| 424|Homo sapiens RIO kinase 3 (yeast) pr... 70 4e-12
Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein. 33 0.78
AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein p... 33 0.78
BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer... 30 4.2
AF408781-1|AAK97501.1| 1091|Homo sapiens deleted in liver cancer... 30 4.2
AF035119-1|AAB87700.1| 1091|Homo sapiens deleted in liver cancer... 30 4.2
AF026219-1|AAB81637.1| 1083|Homo sapiens HP protein protein. 30 4.2
AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein. 30 4.2
BC051805-1|AAH51805.1| 215|Homo sapiens calcium binding protein... 29 9.7
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 29 9.7
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 29 9.7
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 29 9.7
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 29 9.7
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 29 9.7
>BC039729-1|AAH39729.1| 516|Homo sapiens RIOK3 protein protein.
Length = 516
Score = 71.7 bits (168), Expect = 1e-12
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +1
Query: 178 LSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQEIESCNAKEYCDSDAIIA 357
L+D+MSE+ A++LQ+ EE A E V E P + I++ SD ++A
Sbjct: 35 LADVMSEQLAKELQLEEE---AAVFPEVAVA---EGPFITGENIDT-------SSDLMLA 81
Query: 358 KVLQCQFDREHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDDD 507
++LQ ++DRE+D +++R EKK NGD+KVS+S++NYR V + DS +D+
Sbjct: 82 QMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDE 131
>AF013591-1|AAC26080.1| 519|Homo sapiens homolog of the Aspergillus
nidulans sudD gene product protein.
Length = 519
Score = 71.7 bits (168), Expect = 1e-12
Identities = 43/110 (39%), Positives = 69/110 (62%)
Frame = +1
Query: 178 LSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQEIESCNAKEYCDSDAIIA 357
L+D+MSE+ A++LQ+ EE A E V E P + I++ SD ++A
Sbjct: 35 LADVMSEQLAKELQLEEE---AAVFPEVAVA---EGPFITGENIDT-------SSDLMLA 81
Query: 358 KVLQCQFDREHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDDD 507
++LQ ++DRE+D +++R EKK NGD+KVS+S++NYR V + DS +D+
Sbjct: 82 QMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDE 131
>BC028360-1|AAH28360.1| 424|Homo sapiens RIO kinase 3 (yeast)
protein.
Length = 424
Score = 70.1 bits (164), Expect = 4e-12
Identities = 42/110 (38%), Positives = 69/110 (62%)
Frame = +1
Query: 178 LSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQEIESCNAKEYCDSDAIIA 357
L+D+MSE+ A++LQ+ EE A E V E P + I++ SD ++A
Sbjct: 35 LADVMSEQLAKELQLEEE---AAVFPEVAVA---EGPFITGENIDT-------SSDLMLA 81
Query: 358 KVLQCQFDREHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDDD 507
++LQ ++DRE+D +++R +KK NGD+KVS+S++NYR V + DS +D+
Sbjct: 82 QMLQMEYDREYDAQLRREKKKFNGDSKVSISFENYRKVHPYEDSDSSEDE 131
>Z15005-1|CAA78727.1| 2663|Homo sapiens CENP-E protein.
Length = 2663
Score = 32.7 bits (71), Expect = 0.78
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 163 VEAQKLSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEV 285
+E +L + + E ARDL++++E+K A LS+ H T +++
Sbjct: 1903 LERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKL 1943
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 163 VEAQKLSDIMSEEFARDLQVREEIKFAE-HLSEHH--VGTSNEVPVELLQEIESCNAKEY 333
VE +L + + E RDL+ +EE+K HL EH + + E EI +
Sbjct: 1700 VERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLE 1759
Query: 334 CDSDAIIAKVLQCQ 375
+DA+ A+ L+ Q
Sbjct: 1760 HSNDALKAQDLKIQ 1773
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +1
Query: 166 EAQKLSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQ---EIESCNAKEYC 336
E+ +L + + E A+ L+ EE+K A + T NE+ V L + EI + +
Sbjct: 1457 ESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEA 1516
Query: 337 DSDAIIAKVLQCQFDREHDDEIKRVEK 417
+D + K+ + +++E IK++ +
Sbjct: 1517 INDKLQNKIQEI-YEKEEQLNIKQISE 1542
>AB209996-1|BAE06078.1| 2585|Homo sapiens CENPE variant protein
protein.
Length = 2585
Score = 32.7 bits (71), Expect = 0.78
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 163 VEAQKLSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEV 285
+E +L + + E ARDL++++E+K A LS+ H T +++
Sbjct: 1883 LERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKL 1923
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 163 VEAQKLSDIMSEEFARDLQVREEIKFAE-HLSEHH--VGTSNEVPVELLQEIESCNAKEY 333
VE +L + + E RDL+ +EE+K HL EH + + E EI +
Sbjct: 1680 VERDQLKENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLE 1739
Query: 334 CDSDAIIAKVLQCQ 375
+DA+ A+ L+ Q
Sbjct: 1740 HSNDALKAQDLKIQ 1753
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +1
Query: 166 EAQKLSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQ---EIESCNAKEYC 336
E+ +L + + E A+ L+ EE+K A + T NE+ V L + EI + +
Sbjct: 1437 ESDQLKENIKEIVAKHLETEEELKVAHCCLKEQEETINELRVNLSEKETEISTIQKQLEA 1496
Query: 337 DSDAIIAKVLQCQFDREHDDEIKRVEK 417
+D + K+ + +++E IK++ +
Sbjct: 1497 INDKLQNKIQEI-YEKEEQFNIKQISE 1522
>BC054511-1|AAH54511.1| 1528|Homo sapiens deleted in liver cancer 1
protein.
Length = 1528
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 382 REHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDD 504
RE+ + + K+RN + +S Y NVP ++Y S D
Sbjct: 853 RENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD 893
>AF408781-1|AAK97501.1| 1091|Homo sapiens deleted in liver cancer 1
protein.
Length = 1091
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 382 REHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDD 504
RE+ + + K+RN + +S Y NVP ++Y S D
Sbjct: 416 RENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD 456
>AF035119-1|AAB87700.1| 1091|Homo sapiens deleted in liver cancer-1
protein.
Length = 1091
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 382 REHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDD 504
RE+ + + K+RN + +S Y NVP ++Y S D
Sbjct: 416 RENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD 456
>AF026219-1|AAB81637.1| 1083|Homo sapiens HP protein protein.
Length = 1083
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 382 REHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDD 504
RE+ + + K+RN + +S Y NVP ++Y S D
Sbjct: 408 RENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD 448
>AB051510-1|BAB21814.1| 1554|Homo sapiens KIAA1723 protein protein.
Length = 1554
Score = 30.3 bits (65), Expect = 4.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 382 REHDDEIKRVEKKRNGDAKVSVSYDNYRNVPSHLIYDSEDD 504
RE+ + + K+RN + +S Y NVP ++Y S D
Sbjct: 879 RENSSDSPKELKRRNSSSSMSSRLSIYDNVPGSILYSSSGD 919
>BC051805-1|AAH51805.1| 215|Homo sapiens calcium binding protein 7
protein.
Length = 215
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +1
Query: 142 WKKVAAPVEAQKLSDIMSEEFARDLQVREEIKFAEHLSEHHVGTSNEVPVELLQEIESCN 321
WK + +L ++ + F L +++ E H+GT+ E PV ++E+C+
Sbjct: 121 WKCDMQKLTVDELKRLLYDTFCEHLSMKDIENIIMTEEESHLGTAEECPV----DVETCS 176
Query: 322 AKEYCDSDAIIAKVLQCQF 378
++ + K L C F
Sbjct: 177 NQQI--RQTCVRKSLICAF 193
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 180 QLLRLYWCCHFFPRIRHDYLVLIRIKTNVKQFINKLVEYFFL 55
+LLR+ F P +R +VL++ NV F L+ + F+
Sbjct: 887 RLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFI 928
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 180 QLLRLYWCCHFFPRIRHDYLVLIRIKTNVKQFINKLVEYFFL 55
+LLR+ F P +R +VL++ NV F L+ + F+
Sbjct: 70 RLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFI 111
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 180 QLLRLYWCCHFFPRIRHDYLVLIRIKTNVKQFINKLVEYFFL 55
+LLR+ F P +R +VL++ NV F L+ + F+
Sbjct: 887 RLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFI 928
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 180 QLLRLYWCCHFFPRIRHDYLVLIRIKTNVKQFINKLVEYFFL 55
+LLR+ F P +R +VL++ NV F L+ + F+
Sbjct: 887 RLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFI 928
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 29.1 bits (62), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 180 QLLRLYWCCHFFPRIRHDYLVLIRIKTNVKQFINKLVEYFFL 55
+LLR+ F P +R +VL++ NV F L+ + F+
Sbjct: 907 RLLRVLKLVRFLPALRRQLVVLVKTMDNVATFCTLLMLFIFI 948
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,575,422
Number of Sequences: 237096
Number of extensions: 1227162
Number of successful extensions: 3093
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3093
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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