Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15l20
         (432 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028363-1|AAH28363.1|  931|Homo sapiens phosphatidylinositol gl...   132   4e-31
AL137607-1|CAB70839.1|  825|Homo sapiens hypothetical protein pr...   132   4e-31
AF109219-1|AAD11432.1|  931|Homo sapiens Mcd4p homolog protein.       132   4e-31
BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.      30   2.9  
AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.              30   2.9  
AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.              30   2.9  
AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.              30   2.9  

>BC028363-1|AAH28363.1|  931|Homo sapiens phosphatidylinositol glycan
            anchor biosynthesis, class N protein.
          Length = 931

 Score =  132 bits (320), Expect = 4e-31
 Identities = 62/119 (52%), Positives = 86/119 (72%)
 Frame = +2

Query: 2    FFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPL 181
            FFGTGNIAS+NSF+L  V CF+T F PF++  L++ K L PF++V CAF AVQ  T+   
Sbjct: 798  FFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSS 857

Query: 182  GCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 358
              L +IVL+ S+IM L   F V++ GSWL+IGTSIS +VIV  +T+F+V +N +A+ +T
Sbjct: 858  KSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 916


>AL137607-1|CAB70839.1|  825|Homo sapiens hypothetical protein
            protein.
          Length = 825

 Score =  132 bits (320), Expect = 4e-31
 Identities = 62/119 (52%), Positives = 86/119 (72%)
 Frame = +2

Query: 2    FFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPL 181
            FFGTGNIAS+NSF+L  V CF+T F PF++  L++ K L PF++V CAF AVQ  T+   
Sbjct: 692  FFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSS 751

Query: 182  GCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 358
              L +IVL+ S+IM L   F V++ GSWL+IGTSIS +VIV  +T+F+V +N +A+ +T
Sbjct: 752  KSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 810


>AF109219-1|AAD11432.1|  931|Homo sapiens Mcd4p homolog protein.
          Length = 931

 Score =  132 bits (320), Expect = 4e-31
 Identities = 62/119 (52%), Positives = 86/119 (72%)
 Frame = +2

Query: 2    FFGTGNIASLNSFELRWVTCFITSFQPFLITTLILMKTLSPFLIVGCAFRAVQFVTKAPL 181
            FFGTGNIAS+NSF+L  V CF+T F PF++  L++ K L PF++V CAF AVQ  T+   
Sbjct: 798  FFGTGNIASINSFDLASVYCFLTVFSPFMMGALMMWKILIPFVLVMCAFEAVQLTTQLSS 857

Query: 182  GCLNIIVLIYSNIMGLQLLFYVRNNGSWLEIGTSISQFVIVQVITLFIVLINQIAKTMT 358
              L +IVL+ S+IM L   F V++ GSWL+IGTSIS +VIV  +T+F+V +N +A+ +T
Sbjct: 858  KSLFLIVLVISDIMALHFFFLVKDYGSWLDIGTSISHYVIVMSMTIFLVFLNGLAQLLT 916


>BC053508-1|AAH53508.1|  412|Homo sapiens ARL6IP2 protein protein.
          Length = 412

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 188 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 292
           LN I ++ + +MGL L+F     YV+ +G + EIGT I Q
Sbjct: 326 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 365


>AF449187-2|AAM97341.1|  579|Homo sapiens ARL6IP2 protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 188 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 292
           LN I ++ + +MGL L+F     YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536


>AF449187-1|AAM97342.1|  583|Homo sapiens ARL6IP2 protein.
          Length = 583

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 188 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 292
           LN I ++ + +MGL L+F     YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536


>AC016995-1|AAX88950.1|  579|Homo sapiens unknown protein.
          Length = 579

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
 Frame = +2

Query: 188 LNIIVLIYSNIMGLQLLF-----YVRNNGSWLEIGTSISQ 292
           LN I ++ + +MGL L+F     YV+ +G + EIGT I Q
Sbjct: 497 LNSIAVLCNLVMGLALIFLCTWAYVKYSGEFREIGTVIDQ 536


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,221,459
Number of Sequences: 237096
Number of extensions: 1192179
Number of successful extensions: 2113
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2113
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)